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contig_metadata

18 rows where analysis = "diamond", bioproject = "PRJNA1167252" and tax_phylum = "Methanobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 18 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1167252 · 18 ✖

analysis 1

  • diamond · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27040531 27040531 PRJNA1167252_P_NODE_28302_length_244_cov_0.912281_g28029_i0 PRJNA1167252 28302 244 0.912281 2.22596564 Methanoregulaceae archaeon PtaB.Bin152 1811723 Archaea Archaea 149 1.2499999999999997e-42   NR OPX74109.1 1811723 g28029 i0 95.1 1.99180327868852 81 4 99.6 0 2 244 79 159 OPX74109.1 MAG: hypothetical protein A4E39_00716 [Methanoregulaceae archaeon PtaB.Bin152] diamond 486 149 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae   Methanoregulaceae archaeon PtaB.Bin152
27072061 27072061 PRJNA1167252_P_NODE_23982_length_251_cov_0.876404_g23709_i0 PRJNA1167252 23982 251 0.876404 2.19977404 Methanothrix sp. 90426 Archaea Archaea 71.2 1.42e-13   NR MDD3566726.1 90426 g23709 i0 100 0.382470119521912 32 0 38.2 0 249 154 98 129 MDD3566726.1 helix-turn-helix domain-containing protein [Methanothrix sp.] diamond 96 71.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
27325031 27325031 PRJNA1167252_P_NODE_23383_length_252_cov_0.871508_g23110_i0 PRJNA1167252 23383 252 0.871508 2.19620016 Methanosarcina sp. WWM596 1434103 Archaea Archaea 102 2.2099999999999994e-23   NR WP_048158928.1 1434103 g23110 i0 59.3 0.964285714285714 81 33 96.4 0 244 2 11 91 WP_048158928.1 hypothetical protein [Methanosarcina sp. WWM596] diamond 243 102 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp. WWM596
27502320 27502320 PRJNA1167252_P_NODE_14683_length_321_cov_0.991935_g14410_i0 PRJNA1167252 14683 321 0.991935 3.18411135 Stenosarchaea group 2290931 Archaea Archaea 124 5.52e-34   NR PPA80244.1 1968520 g14410 i0 72.2 1.99065420560748 72 20 67.3 0 5 220 67 138 PPA80244.1 MAG: hypothetical protein C00003105_02246 [Candidatus Methanomarinus sp. HR1] diamond 639 125 0.992 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Candidatus Methanocomedenaceae Candidatus Methanomarinus Candidatus Methanomarinus sp. HR1
27975696 27975696 PRJNA1167252_P_NODE_25105_length_249_cov_0.886364_g24832_i0 PRJNA1167252 25105 249 0.886364 2.20704636 Methanomicrobiaceae 2194 Archaea Archaea 84.3 1.08e-17   NR MDD3111657.1 2201 g24832 i0 53.6 3.1566265060241 84 29 91.6 2 228 1 78 159 MDD3111657.1 MBL fold metallo-hydrolase [Methanofollis liminatans] diamond 786 84.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanofollis Methanofollis liminatans
28240501 28240501 PRJNA1167252_P_NODE_27146_length_246_cov_0.901734_g26873_i0 PRJNA1167252 27146 246 0.901734 2.21826564 Methanoregulaceae archaeon PtaB.Bin152 1811723 Archaea Archaea 123 1.4e-30   NR OPX73921.1 1811723 g26873 i0 71.6 3.95121951219512 81 23 98.8 0 244 2 4 84 OPX73921.1 MAG: bifunctional preprotein translocase subunit SecD/SecF [Methanoregulaceae archaeon PtaB.Bin152] diamond 972 123 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae   Methanoregulaceae archaeon PtaB.Bin152
28240503 28240503 PRJNA1167252_P_NODE_29186_length_242_cov_0.923077_g28913_i0 PRJNA1167252 29186 242 0.923077 2.23384634 Methanothrix sp. 90426 Archaea Archaea 156 4.65e-46   NR MDD3566244.1 90426 g28913 i0 97.5 0.991735537190083 80 2 99.2 0 242 3 13 92 MDD3566244.1 hypothetical protein [Methanothrix sp.] diamond 240 156 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
28777329 28777329 PRJNA1167252_P_NODE_24747_length_250_cov_0.881356_g24474_i0 PRJNA1167252 24747 250 0.881356 2.20339 Methanothrix sp. 90426 Archaea Archaea 80.5 4.62e-17   NR MDD3564178.1 90426 g24474 i0 100 0.456 38 0 45.6 0 3 116 106 143 MDD3564178.1 GNAT family N-acetyltransferase [Methanothrix sp.] diamond 114 80.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
28967037 28967037 PRJNA1167252_P_NODE_10468_length_387_cov_1.340764_g10195_i0 PRJNA1167252 10468 387 1.340764 5.18875668 Methanosaeta sp. PtaU1.Bin 90426 Archaea Archaea 247 6.07e-81   NR OPY55619.1 1811691 g10195 i0 99.2 0.992248062015504 128 1 99.2 0 2 385 66 193 OPY55619.1 MAG: 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [Methanosaeta sp. PtaU1.Bin055] diamond 384 247 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanosaeta sp. PtaU1.Bin055
29238797 29238797 PRJNA1167252_P_NODE_29269_length_242_cov_0.923077_g28996_i0 PRJNA1167252 29269 242 0.923077 2.23384634 root 1 Root_unresolved Root_unresolved 81.3 4.72e-17   NR MDD3710879.1 90426 g28996 i0 78.3 1.1404958677686 46 10 57 0 241 104 124 169 MDD3710879.1 ribbon-helix-helix protein, CopG family [Methanothrix sp.] diamond 276 81.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
29408847 29408847 PRJNA1167252_P_NODE_22849_length_253_cov_0.866667_g22576_i0 PRJNA1167252 22849 253 0.866667 2.19266751 Methanothrix sp. 90426 Archaea Archaea 171 5.39e-51   NR HOI68412.1 90426 g22576 i0 97.6 0.99604743083004 84 2 99.6 0 252 1 87 170 HOI68412.1 class I SAM-dependent methyltransferase [Methanothrix sp.] diamond 252 171 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
30166717 30166717 PRJNA1167252_P_NODE_16992_length_296_cov_1.399103_g16719_i0 PRJNA1167252 16992 296 1.399103 4.14134488 Methanothrix sp. 90426 Archaea Archaea 112 1.7e-26   NR HNR58493.1 90426 g16719 i0 98.8 0.861486486486487 85 1 86.1 0 17 271 1 85 HNR58493.1 biopolymer transporter Tol [Methanothrix sp.] diamond 255 112 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
30439104 30439104 PRJNA1167252_P_NODE_26473_length_247_cov_0.896552_g26200_i0 PRJNA1167252 26473 247 0.896552 2.21448344 root 1 Root_unresolved Root_unresolved 54.3 3.4e-6   NR WP_154810522.1 38026 g26200 i0 33.3 2.67206477732794 78 51 93.5 1 232 2 811 888 WP_154810522.1 PAS domain S-box protein [Methanolobus vulcani] diamond 660 54.7 0.992687385740402 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanolobus Methanolobus vulcani
30798670 30798670 PRJNA1167252_P_NODE_18234_length_286_cov_1.009390_g17961_i0 PRJNA1167252 18234 286 1.00939 2.8868554 Methanothrix harundinacea 301375 Archaea Archaea 93.6 8.68e-22   NR WP_014587922.1 301375 g17961 i0 80.3 0.63986013986014 61 12 64 0 286 104 99 159 WP_014587922.1 3-isopropylmalate dehydratase small subunit [Methanothrix harundinacea] diamond 183 93.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix harundinacea
31114517 31114517 PRJNA1167252_P_NODE_26335_length_247_cov_0.896552_g26062_i0 PRJNA1167252 26335 247 0.896552 2.21448344 Methanofastidiosum sp. 2666341 Archaea Archaea 82.8 2.19e-16   NR MCC7571933.1 2666341 g26062 i0 97.7 0.522267206477733 43 1 52.2 0 117 245 1 43 MCC7571933.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [Methanofastidiosum sp.] diamond 129 82.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Methanofastidiosia Candidatus Methanofastidiosales Candidatus Methanofastidiosaceae Candidatus Methanofastidiosum Methanofastidiosum sp.
31165270 31165270 PRJNA1167252_P_NODE_28015_length_244_cov_0.912281_g27742_i0 PRJNA1167252 28015 244 0.912281 2.22596564 Methanolinea 499551 Archaea Archaea 160 4.6e-46   NR OPX68765.1 1811720 g27742 i0 100 1.81967213114754 74 0 91 0 2 223 60 133 OPX68765.1 MAG: Two component regulator propeller [Methanoregulaceae archaeon PtaB.Bin009] diamond 444 160 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae   Methanoregulaceae archaeon PtaB.Bin009
31399496 31399496 PRJNA1167252_P_NODE_26516_length_247_cov_0.896552_g26243_i0 PRJNA1167252 26516 247 0.896552 2.21448344 Methanosaeta sp. PtaU1.Bin 90426 Archaea Archaea 62.4 4.82e-9   NR OPY57110.1 1811691 g26243 i0 96.9 0.765182186234818 32 1 38.9 0 247 152 778 809 OPY57110.1 MAG: putative lyase [Methanosaeta sp. PtaU1.Bin055] diamond 189 62.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanosaeta sp. PtaU1.Bin055
32063520 32063520 PRJNA1167252_P_NODE_24838_length_250_cov_0.864407_g24565_i0 PRJNA1167252 24838 250 0.864407 2.1610175 Methanoregulaceae archaeon PtaU1.Bin 2485498 Archaea Archaea 72.8 1.09e-13   NR OPY41132.1 1811724 g24565 i0 58.6 0.84 70 29 84 0 24 233 98 167 OPY41132.1 MAG: hypothetical protein A4E40_00665 [Methanoregulaceae archaeon PtaU1.Bin059] diamond 210 72.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae   Methanoregulaceae archaeon PtaU1.Bin059

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;