RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1167252" and tax_phylum = "Chlorobiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlorobiota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1167252 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29093343 29093343 PRJNA1167252_P_NODE_26828_length_246_cov_0.901734_g26555_i0 PRJNA1167252 26828 246 0.901734 2.21826564 Chlorobiota bacterium 2268192 Bacteria Bacteria 127 6.42e-32   NR NOY37394.1 2268192 g26555 i0 77.8 0.98780487804878 81 18 98.8 0 2 244 950 1030 NOY37394.1 hypothetical protein [Chlorobiota bacterium] diamond 243 127 1 Bacteria FCB group Pseudomonadati Chlorobiota         Chlorobiota bacterium
31968607 31968607 PRJNA1167252_P_NODE_22918_length_253_cov_0.866667_g22645_i0 PRJNA1167252 22918 253 0.866667 2.19266751 Chlorobiota bacterium 2268192 Bacteria Bacteria 150 5.28e-44   NR NOX16978.1 2268192 g22645 i0 79.8 0.99604743083004 84 17 99.6 0 1 252 22 105 NOX16978.1 NAD(P)H-dependent oxidoreductase [Chlorobiota bacterium] diamond 252 150 1 Bacteria FCB group Pseudomonadati Chlorobiota         Chlorobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;