RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1167252" and tax_kingdom = "Promethearchaeati"

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tax_superkingdom 1

tax_kingdom 1

  • Promethearchaeati · 2 ✖

bioproject 1

  • PRJNA1167252 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30186022 30186022 PRJNA1167252_P_NODE_29312_length_242_cov_0.923077_g29039_i0 PRJNA1167252 29312 242 0.923077 2.23384634 Archaea 2157 Archaea Archaea 106 8.82e-27   NR MBY8999926.1 2026747 g29039 i0 60.8 3.9297520661157 79 31 97.9 0 238 2 72 150 MBY8999926.1 tRNA-intron lyase [Candidatus Heimdallarchaeota archaeon] diamond 951 107 0.990654205607477 Archaea   Promethearchaeati Candidatus Heimdallarchaeota         Candidatus Heimdallarchaeota archaeon
30546025 30546025 PRJNA1167252_P_NODE_23193_length_252_cov_0.871508_g22920_i0 PRJNA1167252 23193 252 0.871508 2.19620016 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 144 2.17e-39   NR MCF2136457.1 2053491 g22920 i0 80.7 0.988095238095238 83 16 98.8 0 2 250 168 250 MCF2136457.1 C25 family cysteine peptidase [Candidatus Thorarchaeota archaeon] diamond 249 144 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;