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contig_metadata

16 rows where analysis = "diamond", bioproject = "PRJNA1164198" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 16 ✖

bioproject 1

  • PRJNA1164198 · 16 ✖

analysis 1

  • diamond · 16 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19437979 19437979 PRJNA1164198_P_NODE_3096_length_714_cov_2.068643_g2872_i0 PRJNA1164198 3096 714 2.068643 14.77011102 Fadolivirus algeromassiliense 3060017 Viruses Viruses 298 1.44e-98   NR YP_010803019.1 3060017 g2872 i0 57 1.98739495798319 237 102 99.6 0 2 712 17 253 YP_010803019.1 peptidase C1a [Fadolivirus algeromassiliense] diamond 1419 298 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Fadolivirus Fadolivirus algeromassiliense
26850764 26850764 PRJNA1164198_P_NODE_28821_length_245_cov_0.906977_g28552_i0 PRJNA1164198 28821 245 0.906977 2.22209365 Tupanvirus soda lake 2126985 Viruses Viruses 50.1 4.98e-5   NR YP_010782233.1 2126985 g28552 i0 39.2 1.93469387755102 79 48 96.7 0 237 1 52 130 YP_010782233.1 hypothetical protein QJ857_gp0474 [Tupanvirus soda lake] diamond 474 50.1 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Tupanvirus Tupanvirus salinum
27261810 27261810 PRJNA1164198_P_NODE_6803_length_482_cov_1.760391_g6543_i0 PRJNA1164198 6803 482 1.760391 8.48508462 Tupanvirus soda lake 2126985 Viruses Viruses 198 2.08e-57   NR YP_010782121.1 2126985 g6543 i0 61.8 0.977178423236514 157 60 97.7 0 481 11 246 402 YP_010782121.1 arylsulfatase [Tupanvirus soda lake] diamond 471 198 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Tupanvirus Tupanvirus salinum
27388308 27388308 PRJNA1164198_P_NODE_31423_length_234_cov_2.670807_g31154_i0 PRJNA1164198 31423 234 2.670807 6.24968838 Giant panda Iflaviridae 2903093 Viruses Viruses 111 2.69e-26   NR UGV21557.1 2903093 g31154 i0 68 0.961538461538462 75 24 96.2 0 231 7 965 1039 UGV21557.1 MAG: polyprotein [Giant panda Iflaviridae] diamond 225 111 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae   Giant panda Iflaviridae
27609259 27609259 PRJNA1164198_P_NODE_22244_length_263_cov_1.884211_g21975_i0 PRJNA1164198 22244 263 1.884211 4.95547493 Giant panda Iflaviridae 2903093 Viruses Viruses 135 1.68e-34   NR UGV21557.1 2903093 g21975 i0 74.7 0.992395437262357 87 22 99.2 0 2 262 1144 1230 UGV21557.1 MAG: polyprotein [Giant panda Iflaviridae] diamond 261 135 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae   Giant panda Iflaviridae
27988080 27988080 PRJNA1164198_P_NODE_17665_length_294_cov_1.407240_g17396_i0 PRJNA1164198 17665 294 1.40724 4.1372856 Catovirus CTV1 1977631 Viruses Viruses 77.4 1e-15   NR ARF09177.1 1977631 g17396 i0 42.7 0.979591836734694 96 52 98 1 6 293 6 98 ARF09177.1 hypothetical protein Catovirus_2_126 [Catovirus CTV1] diamond 288 77.4 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Catovirus Catovirus CTV1
28146115 28146115 PRJNA1164198_P_NODE_28545_length_246_cov_0.901734_g28276_i0 PRJNA1164198 28545 246 0.901734 2.21826564 Dickeya phage vB_DsoM_JA11 2382310 Viruses Viruses 82 1.63e-17   NR YP_009813682.1 2382310 g28276 i0 56.4 0.951219512195122 78 34 95.1 0 245 12 31 108 YP_009813682.1 hypothetical protein HOU32_gp237 [Dickeya phage vB_DsoM_JA11] diamond 234 82 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Salmondvirus Salmondvirus JA11
28808640 28808640 PRJNA1164198_P_NODE_28708_length_245_cov_1.523256_g28439_i0 PRJNA1164198 28708 245 1.523256 3.7319772 Giant panda Iflaviridae 2903093 Viruses Viruses 116 5.36e-28   NR UGV21557.1 2903093 g28439 i0 69.5 1.00408163265306 82 24 99.2 1 3 245 697 778 UGV21557.1 MAG: polyprotein [Giant panda Iflaviridae] diamond 246 116 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae   Giant panda Iflaviridae
28872004 28872004 PRJNA1164198_P_NODE_10908_length_376_cov_2.435644_g10640_i0 PRJNA1164198 10908 376 2.435644 9.15802144 Giant panda Iflaviridae 2903093 Viruses Viruses 218 4.45e-63   NR UGV21557.1 2903093 g10640 i0 87.9 0.98936170212766 124 15 98.9 0 374 3 170 293 UGV21557.1 MAG: polyprotein [Giant panda Iflaviridae] diamond 372 218 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae   Giant panda Iflaviridae
29819117 29819117 PRJNA1164198_P_NODE_12531_length_350_cov_1.891697_g12262_i0 PRJNA1164198 12531 350 1.891697 6.6209395 Giant panda Iflaviridae 2903093 Viruses Viruses 164 3.16e-44   NR UGV21557.1 2903093 g12262 i0 66.1 0.985714285714286 115 39 98.6 0 5 349 1228 1342 UGV21557.1 MAG: polyprotein [Giant panda Iflaviridae] diamond 345 164 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae   Giant panda Iflaviridae
30609055 30609055 PRJNA1164198_P_NODE_4633_length_584_cov_1.921722_g4385_i0 PRJNA1164198 4633 584 1.921722 11.22285648 Giant panda Iflaviridae 2903093 Viruses Viruses 226 1.1e-64   NR UGV21557.1 2903093 g4385 i0 57.9 0.976027397260274 190 80 97.6 0 581 12 1772 1961 UGV21557.1 MAG: polyprotein [Giant panda Iflaviridae] diamond 570 226 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae   Giant panda Iflaviridae
30925352 30925352 PRJNA1164198_P_NODE_21934_length_265_cov_2.135417_g21665_i0 PRJNA1164198 21934 265 2.135417 5.65885505 Crogonang virus 178 3063382 Viruses Viruses 86.3 5.01e-18   NR WPR18581.1 3063382 g21665 i0 53.6 0.950943396226415 84 36 95.1 1 264 13 23 103 WPR18581.1 MAG: RNA-dependent RNA polymerase, partial [Crogonang virus 178] diamond 252 86.3 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales     Crogonang virus 178
31145840 31145840 PRJNA1164198_P_NODE_21375_length_269_cov_0.979592_g21106_i0 PRJNA1164198 21375 269 0.979592 2.63510248 Giant panda Iflaviridae 2903093 Viruses Viruses 171 2.8e-47   NR UGV21557.1 2903093 g21106 i0 93.3 0.992565055762082 89 6 99.3 0 268 2 284 372 UGV21557.1 MAG: polyprotein [Giant panda Iflaviridae] diamond 267 171 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae   Giant panda Iflaviridae
32443542 32443542 PRJNA1164198_P_NODE_27779_length_247_cov_0.896552_g27510_i0 PRJNA1164198 27779 247 0.896552 2.21448344 Acanthamoeba polyphaga mimivirus 212035 Viruses Viruses 88.2 4.51e-19   NR AVG46078.1 212035 g27510 i0 63 2.95141700404858 81 28 98.4 2 3 245 98 176 AVG46078.1 hypothetical protein [Acanthamoeba polyphaga mimivirus] diamond 729 88.2 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Mimivirus Mimivirus bradfordmassiliense
32664082 32664082 PRJNA1164198_P_NODE_29880_length_243_cov_1.835294_g29611_i0 PRJNA1164198 29880 243 1.835294 4.45976442 Saccharomyces 2 3431059 Viruses Viruses 120 1.64e-29   NR NP_660178.1 186772 g29611 i0 76.3 0.987654320987654 80 19 98.8 0 3 242 21 100 NP_660178.1 RNA-dependent RNA polymerase [Saccharomyces 20S RNA narnavirus] diamond 240 120 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Narnavirus saccharominor
32758732 32758732 PRJNA1164198_P_NODE_5700_length_527_cov_2.603524_g5445_i0 PRJNA1164198 5700 527 2.603524 13.72057148 Giant panda Iflaviridae 2903093 Viruses Viruses 226 9.71e-65   NR UGV21557.1 2903093 g5445 i0 62.6 0.973434535104364 171 63 97.3 1 513 1 2060 2229 UGV21557.1 MAG: polyprotein [Giant panda Iflaviridae] diamond 513 226 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae   Giant panda Iflaviridae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;