RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1164198" and tax_phylum = "Platyhelminthes"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1164198 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27533689 27533689 PRJNA1164198_P_NODE_6643_length_488_cov_1.684337_g6383_i0 PRJNA1164198 6643 488 1.684337 8.21956456 Opisthokonta 33154 Platyhelminthes Platyhelminthes 57.4 6.13e-7   NR KAF6771429.1 100269 g6383 i0 32.4 5.51434426229508 68 46 41.8 0 5 208 87 154 KAF6771429.1 hypothetical protein AHF37_09851 [Paragonimus kellicotti] diamond 2691 57.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Troglotrematidae Paragonimus Paragonimus kellicotti
32095183 32095183 PRJNA1164198_P_NODE_11678_length_364_cov_1.072165_g11410_i0 PRJNA1164198 11678 364 1.072165 3.9026806 Hymenolepis microstoma 85433 Platyhelminthes Platyhelminthes 48.1 0.00171   NR CDS30671.2 85433 g11410 i0 35.2 1.13736263736264 71 46 58.5 0 2 214 273 343 CDS30671.2 Aquaporin [Hymenolepis microstoma] diamond 414 48.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis microstoma

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;