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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1164198" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1164198 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32475058 32475058 PRJNA1164198_P_NODE_24679_length_252_cov_0.871508_g24410_i0 PRJNA1164198 24679 252 0.871508 2.19620016 Perkinsus chesapeaki 330153 SAR_Eukaryotes SAR_Eukaryotes 92.4 1.9300000000000003e-21   NR KAF4667593.1 330153 g24410 i0 54.8 0.869047619047619 73 33 86.9 0 30 248 14 86 KAF4667593.1 signal recognition particle 19kDa [Perkinsus chesapeaki] diamond 219 92.4 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki
32840758 32840758 PRJNA1164198_P_NODE_26680_length_249_cov_0.886364_g26411_i0 PRJNA1164198 26680 249 0.886364 2.20704636 root 1 Root_unresolved Root_unresolved 43.1 0.0283   NR KAF4648167.1 32597 g26411 i0 35.1 2.6144578313253 77 50 92.8 0 2 232 333 409 KAF4648167.1 hypothetical protein FOZ61_003079, partial [Perkinsus olseni] diamond 651 43.5 0.990804597701149 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;