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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA1164198" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 9 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1164198 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26850763 26850763 PRJNA1164198_P_NODE_27221_length_248_cov_0.891429_g26952_i0 PRJNA1164198 27221 248 0.891429 2.21074392 Chloroflexota bacterium 2026724 Bacteria Bacteria 87 2.55e-19   NR MXY79866.1 2026724 g26952 i0 48.1 1.92338709677419 79 39 95.6 2 245 9 27 103 MXY79866.1 hypothetical protein [Chloroflexota bacterium] diamond 477 87 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
26882384 26882384 PRJNA1164198_P_NODE_9681_length_400_cov_0.871560_g9414_i0 PRJNA1164198 9681 400 0.87156 3.48624 Chloroflexus sp. MS-CIW-1 3055768 Bacteria Bacteria 44.3 0.0405   NR MDN5272374.1 3055768 g9414 i0 28.1 0.72 96 57 63 2 6 257 60 155 MDN5272374.1 TrkA C-terminal domain-containing protein [Chloroflexus sp. MS-CIW-1] diamond 288 44.3 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Chloroflexaceae Chloroflexus Chloroflexus sp. MS-CIW-1
29314149 29314149 PRJNA1164198_P_NODE_11009_length_375_cov_0.745033_g10741_i0 PRJNA1164198 11009 375 0.745033 2.79387375 Chloroflexota bacterium 2026724 Bacteria Bacteria 44.3 0.0434   NR NMD30575.1 2026724 g10741 i0 35.2 0.432 54 35 43.2 0 325 164 411 464 NMD30575.1 transporter [Chloroflexota bacterium] diamond 162 44.3 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29471708 29471708 PRJNA1164198_P_NODE_6990_length_475_cov_1.430348_g6729_i0 PRJNA1164198 6990 475 1.430348 6.794153 Anaerolineales bacterium 2073117 Bacteria Bacteria 73.6 8.68e-12   NR MCA9992201.1 2073117 g6729 i0 34.6 0.966315789473684 153 94 95.4 3 1 453 1307 1455 MCA9992201.1 tandem-95 repeat protein [Anaerolineales bacterium] diamond 459 73.6 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
29692699 29692699 PRJNA1164198_P_NODE_28310_length_246_cov_0.901734_g28041_i0 PRJNA1164198 28310 246 0.901734 2.21826564 Caldilineaceae bacterium 2614250 Bacteria Bacteria 117 2.84e-28   NR MBX3014934.1 2614250 g28041 i0 78.5 1.9390243902439 79 17 96.3 0 242 6 920 998 MBX3014934.1 glycosyl hydrolase [Caldilineaceae bacterium] diamond 477 117 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
29914280 29914280 PRJNA1164198_P_NODE_27331_length_248_cov_0.891429_g27062_i0 PRJNA1164198 27331 248 0.891429 2.21074392 Chloroflexota bacterium 2026724 Bacteria Bacteria 98.6 2.95e-23   NR MCL5995919.1 2026724 g27062 i0 63.4 0.991935483870968 82 30 99.2 0 247 2 138 219 MCL5995919.1 zinc metallopeptidase [Chloroflexota bacterium] diamond 246 98.6 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29965019 29965019 PRJNA1164198_P_NODE_30771_length_242_cov_0.923077_g30502_i0 PRJNA1164198 30771 242 0.923077 2.23384634 Bacteria 2 Bacteria Bacteria 73.2 7.17e-13   NR MBL1135783.1 2026724 g30502 i0 56.8 9.3099173553719 74 26 84.3 3 207 4 19 92 MBL1135783.1 hypothetical protein [Chloroflexota bacterium] diamond 2253 73.2 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30912979 30912979 PRJNA1164198_P_NODE_23374_length_257_cov_1.250000_g23105_i0 PRJNA1164198 23374 257 1.25 3.2125 root 1 Root_unresolved Root_unresolved 42.7 0.0118   NR MEA1958913.1 2026724 g23105 i0 77.3 0.560311284046693 22 5 25.7 0 95 160 43 64 MEA1958913.1 LNR domain-containing protein [Chloroflexota bacterium] diamond 144 42.7 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
32695641 32695641 PRJNA1164198_P_NODE_26420_length_249_cov_0.886364_g26151_i0 PRJNA1164198 26420 249 0.886364 2.20704636 Chloroflexota bacterium 2026724 Bacteria Bacteria 41.2 0.0448   NR MCU0484310.1 2026724 g26151 i0 34.4 0.734939759036145 61 28 59 2 243 97 23 83 MCU0484310.1 hypothetical protein [Chloroflexota bacterium] diamond 183 41.2 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;