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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA1164198" and tax_kingdom = "Fusobacteriati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Fusobacteriati · 9 ✖

bioproject 1

  • PRJNA1164198 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2862800 2862800 PRJNA1164198_P_NODE_20763_length_272_cov_1.959799_g20494_i0 PRJNA1164198 20763 272 1.959799 5.33065328 Cetobacterium 180162 Bacteria Bacteria 144 4.8899999999999997e-39   NR WP_266187309.1 188913 g20494 i0 96.2 2.61397058823529 78 3 86 0 234 1 106 183 WP_266187309.1 RNA polymerase sigma factor RpoD [Cetobacterium somerae] diamond 711 145 0.993103448275862 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium somerae
15614839 15614839 PRJNA1164198_P_NODE_8213_length_435_cov_7.104972_g7951_i0 PRJNA1164198 8213 435 7.104972 30.9066282 Cetobacterium sp. ZOR 2071632 Bacteria Bacteria 208 8.89e-67   NR WP_047395296.1 1339239 g7951 i0 100 0.820689655172414 119 0 82.1 0 407 51 1 119 WP_047395296.1 hypothetical protein [Cetobacterium sp. ZOR0034] diamond 357 208 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZOR0034
27324974 27324974 PRJNA1164198_P_NODE_16543_length_304_cov_1.350649_g16274_i0 PRJNA1164198 16543 304 1.350649 4.10597296 Cetobacterium sp. 2071632 Bacteria Bacteria 115 2.06e-27   NR WP_291941771.1 2071632 g16274 i0 85 1.97368421052632 100 15 98.7 0 302 3 67 166 WP_291941771.1 translation initiation factor IF-2 [Cetobacterium sp.] diamond 600 115 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp.
27451513 27451513 PRJNA1164198_P_NODE_13943_length_331_cov_2.248062_g13674_i0 PRJNA1164198 13943 331 2.248062 7.44108522 uncultured Cetobacterium sp. 527638 Bacteria Bacteria 106 3.65e-26   NR WP_294093487.1 527638 g13674 i0 98.1 0.48036253776435 53 1 48 0 171 329 1 53 WP_294093487.1 HD domain-containing protein [uncultured Cetobacterium sp.] diamond 159 106 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium uncultured Cetobacterium sp.
28840438 28840438 PRJNA1164198_P_NODE_22828_length_260_cov_1.251337_g22559_i0 PRJNA1164198 22828 260 1.251337 3.2534762 Fusobacterium 848 Bacteria Bacteria 43.5 0.0227   NR WP_005884745.1 848 g22559 i0 42.5 0.461538461538462 40 23 46.2 0 113 232 59 98 WP_005884745.1 MULTISPECIES: DNA-binding protein WhiA [Fusobacterium] diamond 120 43.5 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium  
29219564 29219564 PRJNA1164198_P_NODE_16069_length_309_cov_1.275424_g15800_i0 PRJNA1164198 16069 309 1.275424 3.94106016 unclassified Cetobacterium 2630983 Bacteria Bacteria 189 1.1000000000000004e-59   NR WP_047383405.1 2630983 g15800 i0 100 0.951456310679612 98 0 95.1 0 14 307 1 98 WP_047383405.1 MULTISPECIES: nucleoside-diphosphate kinase [unclassified Cetobacterium] diamond 294 189 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
29314151 29314151 PRJNA1164198_P_NODE_15329_length_316_cov_1.283951_g15060_i0 PRJNA1164198 15329 316 1.283951 4.05728516 Cetobacterium sp. ZOR 2071632 Bacteria Bacteria 174 1.04e-49   NR WP_156110627.1 1339239 g15060 i0 98.1 0.977848101265823 103 2 97.8 0 6 314 1 103 WP_156110627.1 putative glycoside hydrolase [Cetobacterium sp. ZOR0034] diamond 309 174 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZOR0034
31019994 31019994 PRJNA1164198_P_NODE_24915_length_252_cov_0.871508_g24646_i0 PRJNA1164198 24915 252 0.871508 2.19620016 Cetobacterium sp. ZOR 2071632 Bacteria Bacteria 175 3e-50   NR WP_047393897.1 1339239 g24646 i0 100 0.988095238095238 83 0 98.8 0 3 251 380 462 WP_047393897.1 S1 RNA-binding domain-containing protein [Cetobacterium sp. ZOR0034] diamond 249 175 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZOR0034
31936862 31936862 PRJNA1164198_P_NODE_24317_length_253_cov_0.866667_g24048_i0 PRJNA1164198 24317 253 0.866667 2.19266751 Cetobacterium sp. NK 2071632 Bacteria Bacteria 159 2.3599999999999996e-47   NR WP_256691072.1 2993530 g24048 i0 95.2 0.99604743083004 84 4 99.6 0 252 1 67 150 WP_256691072.1 MotA/TolQ/ExbB proton channel family protein [Cetobacterium sp. NK01] diamond 252 159 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. NK01

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;