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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA1164198" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 11 ✖

bioproject 1

  • PRJNA1164198 · 11 ✖

analysis 1

  • diamond · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24537941 24537941 PRJNA1164198_P_NODE_3780_length_648_cov_1.213913_g3535_i0 PRJNA1164198 3780 648 1.213913 7.86615624 Eukaryota 2759 Plants Plants 282 9.51e-85   NR PSC75377.1 554055 g3535 i0 64.6 12.3796296296296 212 69 96.8 4 18 644 824 1032 PSC75377.1 eukaryotic translation elongation factor 1 alpha 2 [Micractinium conductrix] diamond 8022 282 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium conductrix
26679669 26679669 PRJNA1164198_P_NODE_20241_length_275_cov_2.950495_g19972_i0 PRJNA1164198 20241 275 2.950495 8.11386125 Chlamydomonadales 3042 Plants Plants 86.3 3.57e-18   NR KAG2482049.1 47281 g19972 i0 50 3.91636363636364 90 43 97.1 2 274 8 1 89 KAG2482049.1 hypothetical protein HYH03_018999 [Edaphochlamys debaryana] diamond 1077 86.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales   Edaphochlamys Edaphochlamys debaryana
26692168 26692168 PRJNA1164198_P_NODE_31741_length_228_cov_2.012903_g31472_i0 PRJNA1164198 31741 228 2.012903 4.5894188400000004 Coccomyxa subellipsoidea C-169 574566 Plants Plants 132 8.32e-38   NR XP_005645730.1 574566 g31472 i0 81.3 20.7236842105263 75 14 98.7 0 227 3 20 94 XP_005645730.1 ribosomal protein S1 [Coccomyxa subellipsoidea C-169] diamond 4725 132 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
27154101 27154101 PRJNA1164198_P_NODE_10362_length_386_cov_2.498403_g10094_i0 PRJNA1164198 10362 386 2.498403 9.64383558 Trebouxiophyceae 75966 Plants Plants 157 5.2e-45   NR PRW39386.1 3076 g10094 i0 58.2 15.1165803108808 122 51 94.8 0 366 1 7 128 PRW39386.1 40S ribosomal S3a-2 isoform B [Chlorella sorokiniana] diamond 5835 158 0.993670886075949 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
27514442 27514442 PRJNA1164198_P_NODE_24303_length_253_cov_0.866667_g24034_i0 PRJNA1164198 24303 253 0.866667 2.19266751 Chlamydomonas eustigma 1157962 Plants Plants 89.7 4.76e-20   NR GAX75726.1 1157962 g24034 i0 56.9 0.853754940711462 72 31 85.4 0 253 38 121 192 GAX75726.1 hypothetical protein CEUSTIGMA_g3169.t1 [Chlamydomonas eustigma] diamond 216 89.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
27830133 27830133 PRJNA1164198_P_NODE_20124_length_276_cov_2.009852_g19855_i0 PRJNA1164198 20124 276 2.009852 5.54719152 Chlamydomonas sp. HS-5 108458 Plants Plants 101 1.55e-25   NR BAA78583.1 108458 g19855 i0 63.3 1.67391304347826 79 29 85.9 0 237 1 7 85 BAA78583.1 60S ribosomal protein L31 [Chlamydomonas sp. HS-5] diamond 462 101 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas sp. HS-5
27924880 27924880 PRJNA1164198_P_NODE_21605_length_267_cov_2.082474_g21336_i0 PRJNA1164198 21605 267 2.082474 5.56020558 Polytomella parva 51329 Plants Plants 132 4.86e-35   NR QKY14960.1 51329 g21336 i0 73.9 0.98876404494382 88 23 98.9 0 3 266 236 323 QKY14960.1 pyruvate dehydrogenase E1 component subunit alpha - subunit beta (PDh-E1 BETA) [Polytomella parva] diamond 264 132 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Polytomella Polytomella parva
28240455 28240455 PRJNA1164198_P_NODE_31066_length_242_cov_0.923077_g30797_i0 PRJNA1164198 31066 242 0.923077 2.23384634 Gonium pectorale 33097 Plants Plants 90.5 2.04e-20   NR KXZ45155.1 33097 g30797 i0 56.6 1.02892561983471 83 33 99.2 1 2 241 53 135 KXZ45155.1 hypothetical protein GPECTOR_58g604 [Gonium pectorale] diamond 249 90.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Gonium Gonium pectorale
29566637 29566637 PRJNA1164198_P_NODE_24330_length_253_cov_0.866667_g24061_i0 PRJNA1164198 24330 253 0.866667 2.19266751 Chlorella desiccata (nom. nud.) 1650286 Plants Plants 84.7 6.92e-17   NR KAL4539999.1 1650286 g24061 i0 51.2 1.99209486166008 84 40 99.6 1 252 1 130 212 KAL4539999.1 hypothetical protein Ndes2526A_g03002 [Chlorella desiccata (nom. nud.)] diamond 504 84.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Nannochloris Nannochloris sp. 'desiccata'
30723132 30723132 PRJNA1164198_P_NODE_21134_length_270_cov_1.583756_g20865_i0 PRJNA1164198 21134 270 1.583756 4.2761412 Eukaryota 2759 Plants Plants 133 1.7999999999999998e-36   NR KAJ9522600.1 44745 g20865 i0 64 53.3555555555556 89 32 98.9 0 269 3 97 185 KAJ9522600.1 hypothetical protein QJQ45_019660 [Haematococcus lacustris] diamond 14406 133 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
31083131 31083131 PRJNA1164198_P_NODE_30455_length_243_cov_0.917647_g30186_i0 PRJNA1164198 30455 243 0.917647 2.22988221 Micractinium conductrix 554055 Plants Plants 74.7 2.02e-13   NR PSC74434.1 554055 g30186 i0 44.3 2.92592592592593 79 44 97.5 0 239 3 15 93 PSC74434.1 translation factor SUI1-like protein [Micractinium conductrix] diamond 711 74.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium conductrix

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;