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contig_metadata

18 rows where analysis = "diamond", bioproject = "PRJNA1164198" and tax_clade = "PVC group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • PVC group · 18 ✖

bioproject 1

  • PRJNA1164198 · 18 ✖

analysis 1

  • diamond · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19437975 19437975 PRJNA1164198_P_NODE_30756_length_242_cov_0.923077_g30487_i0 PRJNA1164198 30756 242 0.923077 2.23384634 Chlamydia ibidis 1405396 Bacteria Bacteria 69.3 9.3e-14   NR EPP34946.1 1405396 g30487 i0 93.8 0.396694214876033 32 2 39.7 0 20 115 1 32 EPP34946.1 hypothetical protein CP10139811_1351, partial [Chlamydia ibidis] diamond 96 69.3 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia ibidis
26977101 26977101 PRJNA1164198_P_NODE_19982_length_277_cov_1.632353_g19713_i0 PRJNA1164198 19982 277 1.632353 4.52161781 Planctomycetota bacterium 2026780 Bacteria Bacteria 43.1 0.0369   NR MBM4009064.1 2026780 g19713 i0 37.5 0.346570397111913 32 20 34.7 0 3 98 145 176 MBM4009064.1 DMT family transporter [Planctomycetota bacterium] diamond 96 43.1 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
27439255 27439255 PRJNA1164198_P_NODE_28563_length_246_cov_0.901734_g28294_i0 PRJNA1164198 28563 246 0.901734 2.21826564 Luteolibacter 518753 Bacteria Bacteria 95.5 1.04e-20   NR WP_200266655.1 454153 g28294 i0 63 1.8780487804878 81 29 97.6 1 5 244 30 110 WP_200266655.1 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor [Luteolibacter pohnpeiensis] diamond 462 95.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter pohnpeiensis
27704209 27704209 PRJNA1164198_P_NODE_1264_length_1061_cov_2.638664_g1118_i0 PRJNA1164198 1264 1061 2.638664 27.99622504 Pirellula sp. 117 Bacteria Bacteria 78.2 1.44e-11   NR MFN7731751.1 117 g1118 i0 37.5 0.452403393025448 160 91 43 4 861 406 184 342 MFN7731751.1 beta strand repeat-containing protein [Pirellula sp.] diamond 480 78.2 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Pirellula Pirellula sp.
28165212 28165212 PRJNA1164198_P_NODE_22745_length_260_cov_2.085561_g22476_i0 PRJNA1164198 22745 260 2.085561 5.4224586 Bacteria 2 Bacteria Bacteria 71.2 4.33e-12   NR MFQ5590482.1 2026778 g22476 i0 48.3 5.00769230769231 89 36 99.2 4 259 2 1255 1336 MFQ5590482.1 hypothetical protein [Phycisphaerae bacterium] diamond 1302 71.2 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae       Phycisphaerae bacterium
28777285 28777285 PRJNA1164198_P_NODE_6287_length_502_cov_1.247086_g6029_i0 PRJNA1164198 6287 502 1.247086 6.26037172 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 223 2.3999999999999996e-69   NR RYD65414.1 2026800 g6029 i0 71.7 0.99203187250996006 166 44 98.6 2 500 6 89 252 RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium] diamond 498 223 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
28859669 28859669 PRJNA1164198_P_NODE_21648_length_267_cov_1.577320_g21379_i0 PRJNA1164198 21648 267 1.57732 4.2114444 Pseudomonadati 3379134 Bacteria Bacteria 94.4 3e-20   NR MDR3625161.1 2047757 g21379 i0 50 12.7078651685393 86 43 96.6 0 1 258 344 429 MDR3625161.1 leucyl aminopeptidase [Chlamydiales bacterium] diamond 3393 94.4 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
28872013 28872013 PRJNA1164198_P_NODE_23808_length_254_cov_1.624309_g23539_i0 PRJNA1164198 23808 254 1.624309 4.12574486 Chlamydia psittaci 83554 Bacteria Bacteria 79 1.68e-17   NR EPP28643.1 1112246 g23539 i0 87.8 0.484251968503937 41 5 48.4 0 4 126 6 46 EPP28643.1 hypothetical protein CP082626L3_1561, partial [Chlamydia psittaci 08-2626_L3] diamond 123 79 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia psittaci
29377291 29377291 PRJNA1164198_P_NODE_20169_length_276_cov_1.522167_g19900_i0 PRJNA1164198 20169 276 1.522167 4.20118092 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 45.1 0.00454   NR HEU5395808.1 2499141 g19900 i0 44.7 0.41304347826087 38 21 41.3 0 153 266 110 147 HEU5395808.1 DUF6600 domain-containing protein [Verrucomicrobiia bacterium] diamond 114 45.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
29471706 29471706 PRJNA1164198_P_NODE_27590_length_247_cov_1.045977_g27321_i0 PRJNA1164198 27590 247 1.045977 2.58356319 Isosphaeraceae bacterium 2691532 Bacteria Bacteria 43.5 0.0195   NR HEX8203040.1 2691532 g27321 i0 39.4 0.862348178137652 71 35 76.5 1 239 51 62 132 HEX8203040.1 MATE family efflux transporter [Isosphaeraceae bacterium] diamond 213 43.5 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Isosphaerales Isosphaeraceae   Isosphaeraceae bacterium
30514374 30514374 PRJNA1164198_P_NODE_27613_length_247_cov_0.896552_g27344_i0 PRJNA1164198 27613 247 0.896552 2.21448344 Gemmatales bacterium 2838789 Bacteria Bacteria 87.4 4.56e-18   NR HQR41952.1 2838789 g27344 i0 56.6 2.01619433198381 83 35 99.6 1 2 247 159 241 HQR41952.1 CAP domain-containing protein [Gemmatales bacterium] diamond 498 87.4 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales     Gemmatales bacterium
30577342 30577342 PRJNA1164198_P_NODE_28253_length_246_cov_0.901734_g27984_i0 PRJNA1164198 28253 246 0.901734 2.21826564 Candidatus Uabimicrobium amorphum 2596890 Bacteria Bacteria 54.7 2.26e-6   NR WP_151971075.1 2596890 g27984 i0 49.1 0.646341463414634 53 24 62.2 2 23 175 337 388 WP_151971075.1 serine hydrolase domain-containing protein [Candidatus Uabimicrobium amorphum] diamond 159 54.7 1 Bacteria PVC group Pseudomonadati Planctomycetota Candidatus Uabimicrobiia Candidatus Uabimicrobiales Candidatus Uabimicrobiaceae Candidatus Uabimicrobium Candidatus Uabimicrobium amorphum
30893699 30893699 PRJNA1164198_P_NODE_27754_length_247_cov_0.896552_g27485_i0 PRJNA1164198 27754 247 0.896552 2.21448344 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 116 3.71e-28   NR MBN9693850.1 2026799 g27485 i0 86.4 0.801619433198381 66 9 80.2 0 3 200 279 344 MBN9693850.1 CHASE3 domain-containing protein [Verrucomicrobiota bacterium] diamond 198 116 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31133682 31133682 PRJNA1164198_P_NODE_16515_length_304_cov_1.653680_g16246_i0 PRJNA1164198 16515 304 1.65368 5.0271872 Pseudomonadati 3379134 Bacteria Bacteria 73.6 1.11e-12   NR HWL94019.1 2026778 g16246 i0 40.2 4.6875 97 56 93.8 1 12 296 327 423 HWL94019.1 hypothetical protein [Phycisphaerae bacterium] diamond 1425 73.6 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae       Phycisphaerae bacterium
31272787 31272787 PRJNA1164198_P_NODE_25295_length_251_cov_0.876404_g25026_i0 PRJNA1164198 25295 251 0.876404 2.19977404 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 63.9 1.45e-9   NR MBI3878789.1 2026799 g25026 i0 46.9 2.54581673306773 81 43 96.8 0 7 249 2229 2309 MBI3878789.1 tandem-95 repeat protein [Verrucomicrobiota bacterium] diamond 639 63.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31462750 31462750 PRJNA1164198_P_NODE_26416_length_249_cov_0.886364_g26147_i0 PRJNA1164198 26416 249 0.886364 2.20704636 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 42.7 0.038   NR MCB1071097.1 2212473 g26147 i0 29.9 0.927710843373494 77 52 91.6 2 9 236 212 287 MCB1071097.1 ABC transporter permease [Kiritimatiellia bacterium] diamond 231 42.7 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
31892958 31892958 PRJNA1164198_P_NODE_24857_length_252_cov_0.871508_g24588_i0 PRJNA1164198 24857 252 0.871508 2.19620016 root 1 Root_unresolved Root_unresolved 48.5 1.32e-4   NR WP_158265140.1 124 g24588 i0 46.4 2.57142857142857 56 29 65.5 1 40 204 76 131 WP_158265140.1 CBS domain-containing protein [Blastopirellula marina] diamond 648 48.5 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Blastopirellula Blastopirellula marina
32127039 32127039 PRJNA1164198_P_NODE_25858_length_250_cov_0.881356_g25589_i0 PRJNA1164198 25858 250 0.881356 2.20339 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 106 3.96e-25   NR MBI5800971.1 2026799 g25589 i0 71.2 3.96 66 19 79.2 0 199 2 1 66 MBI5800971.1 glutathionylspermidine synthase family protein [Verrucomicrobiota bacterium] diamond 990 106 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;