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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJNA1164198" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 8 ✖

bioproject 1

  • PRJNA1164198 · 8 ✖

analysis 1

  • diamond · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18163598 18163598 PRJNA1164198_P_NODE_27295_length_248_cov_0.891429_g27026_i0 PRJNA1164198 27295 248 0.891429 2.21074392 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 142 2.1299999999999998e-39   NR HEY5268008.1 2973664 g27026 i0 82.9 11.9032258064516 82 14 99.2 0 247 2 14 95 HEY5268008.1 DEAD/DEAH box helicase family protein [Candidatus Saccharimonadales bacterium] diamond 2952 142 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
27103525 27103525 PRJNA1164198_P_NODE_21262_length_269_cov_1.989796_g20993_i0 PRJNA1164198 21262 269 1.989796 5.35255124 Minisyncoccota bacterium 2053589 Bacteria Bacteria 79.7 5.14e-15   NR MEZ0208637.1 2053589 g20993 i0 40 0.892193308550186 80 48 89.2 0 29 268 1237 1316 MEZ0208637.1 RNase H-like domain-containing protein [Candidatus Paceibacterota bacterium] diamond 240 79.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27893215 27893215 PRJNA1164198_P_NODE_8125_length_438_cov_1.594521_g7863_i0 PRJNA1164198 8125 438 1.594521 6.98400198 Minisyncoccota bacterium 2053589 Bacteria Bacteria 123 2.5199999999999996e-29   NR MEZ0208637.1 2053589 g7863 i0 41 0.986301369863014 144 85 98.6 0 433 2 785 928 MEZ0208637.1 RNase H-like domain-containing protein [Candidatus Paceibacterota bacterium] diamond 432 123 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29396549 29396549 PRJNA1164198_P_NODE_28529_length_246_cov_0.901734_g28260_i0 PRJNA1164198 28529 246 0.901734 2.21826564 Bacteria 2 Bacteria Bacteria 73.9 3.86e-13   NR KKR29838.1 1618552 g28260 i0 92.3 1.90243902439024 39 3 47.6 0 3 119 545 583 KKR29838.1 MAG: type II secretion system protein E [Candidatus Woesebacteria bacterium GW2011_GWA1_39_8] diamond 468 74.3 0.994616419919246 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium GW2011_GWA1_39_8
29787576 29787576 PRJNA1164198_P_NODE_21891_length_266_cov_1.093264_g21622_i0 PRJNA1164198 21891 266 1.093264 2.90808224 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 46.6 0.00193   NR HEY5543938.1 2838779 g21622 i0 35.4 2.67293233082707 79 50 88 1 28 261 38 116 HEY5543938.1 alpha/beta hydrolase [Candidatus Binatia bacterium] diamond 711 46.6 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
30071941 30071941 PRJNA1164198_P_NODE_26012_length_250_cov_0.881356_g25743_i0 PRJNA1164198 26012 250 0.881356 2.20339 Patescibacteria group bacterium 2052139 Bacteria Bacteria 67.8 1.15e-11   NR MDE1970990.1 2052139 g25743 i0 51.7 0.696 58 28 69.6 0 243 70 122 179 MDE1970990.1 HNH endonuclease [Patescibacteria group bacterium] diamond 174 67.8 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
30545981 30545981 PRJNA1164198_P_NODE_29893_length_243_cov_1.823529_g29624_i0 PRJNA1164198 29893 243 1.823529 4.43117547 Candidatus Delongbacteria bacterium 2044594 Bacteria Bacteria 49.7 1.19e-4   NR MFA6654012.1 2044594 g29624 i0 36.6 0.876543209876543 71 37 87.7 3 2 214 18 80 MFA6654012.1 hypothetical protein [Candidatus Delongbacteria bacterium] diamond 213 49.7 1 Bacteria Bacteria candidate phyla   Candidatus Delongiibacteriota         Candidatus Delongbacteria bacterium
31778736 31778736 PRJNA1164198_P_NODE_12297_length_354_cov_1.665480_g12029_i0 PRJNA1164198 12297 354 1.66548 5.8957992 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 43.9 0.038   NR HEX6801329.1 2838779 g12029 i0 46.3 0.457627118644068 54 28 45.8 1 99 260 44 96 HEX6801329.1 HAMP domain-containing sensor histidine kinase [Candidatus Binatia bacterium] diamond 162 43.9 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;