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contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJNA1160211" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 13 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1160211 · 13 ✖

analysis 1

  • diamond · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6687737 6687737 PRJNA1160211_S_NODE_214726_length_295_cov_1.000000_g213493_i0 PRJNA1160211 214726 295 1 2.95 Pseudomonadati 3379134 Bacteria Bacteria 154 6.18e-44   NR HEX9784354.1 2006848 g213493 i0 78.6 5.92881355932203 98 21 99.7 0 2 295 44 141 HEX9784354.1 hypothetical protein [Opitutaceae bacterium] diamond 1749 155 0.993548387096774 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
7416373 7416373 PRJNA1160211_S_NODE_202226_length_308_cov_3.251064_g200993_i0 PRJNA1160211 202226 308 3.251064 10.01327712 Opitutaceae bacterium 2006848 Bacteria Bacteria 191 8.88e-58   NR HEY1109698.1 2006848 g200993 i0 91.6 2.77597402597403 95 8 92.5 0 288 4 93 187 HEY1109698.1 SMP-30/gluconolactonase/LRE family protein [Opitutaceae bacterium] diamond 855 191 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
16887562 16887562 PRJNA1160211_S_NODE_36734_length_622_cov_12.945355_g35607_i0 PRJNA1160211 36734 622 12.945355 80.5201081 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 241 1.37e-75   NR MFM8365765.1 2026799 g35607 i0 57.7 8.02572347266881 208 83 99.8 2 621 1 45 248 MFM8365765.1 alkene reductase [Verrucomicrobiota bacterium] diamond 4992 241 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
20710593 20710593 PRJNA1160211_S_NODE_136917_length_394_cov_3.130841_g135685_i0 PRJNA1160211 136917 394 3.130841 12.335513540000001 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 201 9.79e-59   NR RYD77759.1 2026800 g135685 i0 88 0.951776649746193 125 15 95.2 0 18 392 355 479 RYD77759.1 MAG: hypothetical protein EOP84_15150, partial [Verrucomicrobiaceae bacterium] diamond 375 201 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
27956506 27956506 PRJNA1160211_S_NODE_93845_length_469_cov_8.734848_g92620_i0 PRJNA1160211 93845 469 8.734848 40.96643712 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 162 9.27e-43   NR MBS0645922.1 2026799 g92620 i0 55.7 1.8997867803838 149 66 95.3 0 7 453 768 916 MBS0645922.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 891 162 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28638965 28638965 PRJNA1160211_S_NODE_26427_length_670_cov_12.447236_g25348_i0 PRJNA1160211 26427 670 12.447236 83.3964812 Bacteria 2 Bacteria Bacteria 261 1.9e-76   NR PWU08507.1 2026799 g25348 i0 63.7 4.82686567164179 212 74 94.5 2 634 2 598 807 PWU08507.1 MAG: hypothetical protein C5B50_29435 [Verrucomicrobiota bacterium] diamond 3234 261 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28702017 28702017 PRJNA1160211_S_NODE_203487_length_307_cov_1.316239_g202254_i0 PRJNA1160211 203487 307 1.316239 4.04085373 Bacteria 2 Bacteria Bacteria 115 4.76e-29   NR MBO4716116.1 2026799 g202254 i0 61.1 7.17263843648208 90 34 87.9 1 288 19 57 145 MBO4716116.1 sugar phosphate isomerase/epimerase [Verrucomicrobiota bacterium] diamond 2202 115 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29301891 29301891 PRJNA1160211_S_NODE_230069_length_279_cov_8.053398_g228836_i0 PRJNA1160211 230069 279 8.053398 22.46898042 Pseudomonadati 3379134 Bacteria Bacteria 43.1 0.0417   NR MEI7730436.1 2026799 g228836 i0 29.4 2.1505376344086 85 47 79.6 2 8 229 53 135 MEI7730436.1 cbb3-type cytochrome c oxidase subunit I [Verrucomicrobiota bacterium] diamond 600 43.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29365061 29365061 PRJNA1160211_S_NODE_113089_length_433_cov_4.413889_g111860_i0 PRJNA1160211 113089 433 4.413889 19.11213937 Pseudomonadati 3379134 Bacteria Bacteria 60.1 1.07e-7   NR HEX8372506.1 2201154 g111860 i0 62.8 1.93302540415704 43 16 29.8 0 323 195 6 48 HEX8372506.1 HAD family hydrolase [Chthoniobacterales bacterium] diamond 837 60.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
30470622 30470622 PRJNA1160211_S_NODE_219273_length_290_cov_2.958525_g218040_i0 PRJNA1160211 219273 290 2.958525 8.5797225 Bacteria 2 Bacteria Bacteria 166 6.98e-50   NR MBA4147377.1 2026799 g218040 i0 89.7 1.8 87 9 90 0 28 288 1 87 MBA4147377.1 TetR/AcrR family transcriptional regulator [Verrucomicrobiota bacterium] diamond 522 166 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31335847 31335847 PRJNA1160211_S_NODE_175616_length_340_cov_2.696629_g174383_i0 PRJNA1160211 175616 340 2.696629 9.1685386 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 134 6.17e-36   NR HVV74363.1 2499141 g174383 i0 62 2.85 108 40 95.3 1 338 15 61 167 HVV74363.1 SDR family NAD(P)-dependent oxidoreductase [Verrucomicrobiia bacterium] diamond 969 134 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
32126997 32126997 PRJNA1160211_S_NODE_207358_length_302_cov_9.043668_g206125_i0 PRJNA1160211 207358 302 9.043668 27.31187736 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 152 1.74e-40   NR MBM3851763.1 2026799 g206125 i0 77.9 0.943708609271523 95 21 94.4 0 16 300 105 199 MBM3851763.1 TonB-dependent receptor [Verrucomicrobiota bacterium] diamond 285 152 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32285364 32285364 PRJNA1160211_S_NODE_93859_length_469_cov_7.891414_g92634_i0 PRJNA1160211 93859 469 7.891414 37.01073166 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 276 2.55e-92   NR MBS0646142.1 2026799 g92634 i0 89.3 0.953091684434968 149 16 95.3 0 23 469 56 204 MBS0646142.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 447 276 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;