RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA1160211" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1160211 · 7 ✖

analysis 1

  • diamond · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27166684 27166684 PRJNA1160211_S_NODE_267662_length_249_cov_0.914773_g266429_i0 PRJNA1160211 267662 249 0.914773 2.27778477 Anneissia japonica 1529436 Echinodermata other_Eukaryota 130 6.23e-36   NR XP_033099893.1 1529436 g266429 i0 73.2 0.987951807228916 82 22 98.8 0 248 3 93 174 XP_033099893.1 uncharacterized protein LOC117103443 [Anneissia japonica] diamond 246 130 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
27704187 27704187 PRJNA1160211_S_NODE_273264_length_246_cov_0.971098_g272031_i0 PRJNA1160211 273264 246 0.971098 2.38890108 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 120 1.27e-29   NR XP_030834486.1 7668 g272031 i0 71.3 6.85365853658537 80 23 97.6 0 241 2 405 484 XP_030834486.1 uncharacterized protein LOC115921289 [Strongylocentrotus purpuratus] diamond 1686 120 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
27830088 27830088 PRJNA1160211_S_NODE_209964_length_300_cov_1.096916_g208731_i0 PRJNA1160211 209964 300 1.096916 3.290748 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 108 4.07e-25   NR KAJ8046701.1 206669 g208731 i0 56.6 0.99 99 43 99 0 298 2 1059 1157 KAJ8046701.1 RNA-directed DNA polymerase from mobile element jockey [Holothuria leucospilota] diamond 297 108 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
28303740 28303740 PRJNA1160211_S_NODE_275146_length_245_cov_1.087209_g273913_i0 PRJNA1160211 275146 245 1.087209 2.66366205 Diadema antillarum 105358 Echinodermata other_Eukaryota 117 2.05e-28   NR XP_071482577.1 105358 g273913 i0 66.3 3.93061224489796 80 27 98 0 4 243 532 611 XP_071482577.1 uncharacterized protein [Diadema antillarum] diamond 963 117 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
29648742 29648742 PRJNA1160211_S_NODE_18110_length_723_cov_20.698462_g17146_i0 PRJNA1160211 18110 723 20.698462 149.64988026 Metazoa 33208 Echinodermata other_Eukaryota 52.8 7.4e-4   NR XP_063959288.1 7653 g17146 i0 52.5 2.39004149377593 59 21 23.2 3 703 536 1133 1187 XP_063959288.1 sortilin-related receptor-like [Lytechinus pictus] diamond 1728 53.1 0.994350282485876 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
30040415 30040415 PRJNA1160211_S_NODE_279111_length_243_cov_0.905882_g277878_i0 PRJNA1160211 279111 243 0.905882 2.20129326 Apostichopus japonicus 307972 Echinodermata other_Eukaryota 112 3.4400000000000003e-29   NR PIK50568.1 307972 g277878 i0 70.9 1.95061728395062 79 23 97.5 0 241 5 45 123 PIK50568.1 reverse transcriptase [Apostichopus japonicus] diamond 474 112 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Stichopodidae Apostichopus Apostichopus japonicus
32789941 32789941 PRJNA1160211_S_NODE_176680_length_339_cov_0.872180_g175447_i0 PRJNA1160211 176680 339 0.87218 2.9566902 Anneissia japonica 1529436 Echinodermata other_Eukaryota 117 1.41e-30   NR XP_033099893.1 1529436 g175447 i0 59.2 0.911504424778761 103 42 91.2 0 30 338 18 120 XP_033099893.1 uncharacterized protein LOC117103443 [Anneissia japonica] diamond 309 117 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;