RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1160211" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1160211 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28240407 28240407 PRJNA1160211_S_NODE_251646_length_260_cov_4.197861_g250413_i0 PRJNA1160211 251646 260 4.197861 10.9144386 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 43.1 0.0148   NR HZP42555.1 2838779 g250413 i0 43.3 0.692307692307692 60 30 64.6 1 44 211 34 93 HZP42555.1 hypothetical protein [Candidatus Binatia bacterium] diamond 180 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32746469 32746469 PRJNA1160211_S_NODE_25620_length_675_cov_2.214286_g24549_i0 PRJNA1160211 25620 675 2.214286 14.9464305 Pseudomonadati 3379134 Bacteria Bacteria 54.3 1.44e-4   NR HEX3409069.1 2785449 g24549 i0 71.9 1.04 32 9 14.2 0 2 97 527 558 HEX3409069.1 multicopper oxidase domain-containing protein [Candidatus Binataceae bacterium] diamond 702 54.3 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;