contig_metadata
5 rows where analysis = "diamond", bioproject = "PRJNA1160211" and tax_phylum = "Candidatus Altimarinota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4137162 | 4137162 | PRJNA1160211_S_NODE_287504_length_235_cov_3.604938_g286271_i0 | PRJNA1160211 | 287504 | 235 | 3.604938 | 8.4716043 | Candidatus Gracilibacteria bacterium GN | 2044595 | Bacteria | Bacteria | 144 | 1.97e-41 | NR | RAL56550.1 | 1914866 | g286271 | i0 | 98.6 | 0.94468085106383 | 74 | 1 | 94.5 | 0 | 2 | 223 | 41 | 114 | RAL56550.1 ATP-dependent Clp protease proteolytic subunit [Candidatus Gracilibacteria bacterium GN02-873] | diamond | 222 | 144 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Altimarinota | Candidatus Gracilibacteria bacterium GN02-873 | ||||||
| 28417955 | 28417955 | PRJNA1160211_S_NODE_108746_length_441_cov_2.076087_g107518_i0 | PRJNA1160211 | 108746 | 441 | 2.076087 | 9.15554367 | Bacteria | 2 | Bacteria | Bacteria | 182 | 1.79e-50 | NR | MCH8518297.1 | 2044595 | g107518 | i0 | 67.9 | 11.6598639455782 | 134 | 40 | 91.2 | 2 | 3 | 404 | 429 | 559 | MCH8518297.1 DEAD/DEAH box helicase family protein [Candidatus Altimarinota bacterium] | diamond | 5142 | 183 | 0.994535519125683 | Bacteria | Bacteria candidate phyla | Candidatus Altimarinota | Candidatus Altimarinota bacterium | ||||||
| 29629499 | 29629499 | PRJNA1160211_S_NODE_84510_length_488_cov_67.865060_g83291_i0 | PRJNA1160211 | 84510 | 488 | 67.86506 | 331.1814928 | Candidatus Altimarinota bacterium | 2044595 | Bacteria | Bacteria | 129 | 3.2099999999999996e-31 | NR | RKW24136.1 | 2044595 | g83291 | i0 | 100 | 0.418032786885246 | 68 | 0 | 41.8 | 0 | 101 | 304 | 709 | 776 | RKW24136.1 MAG: DUF5011 domain-containing protein [Candidatus Altimarinota bacterium] | diamond | 204 | 129 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Altimarinota | Candidatus Altimarinota bacterium | ||||||
| 30545964 | 30545964 | PRJNA1160211_S_NODE_80413_length_497_cov_11.655660_g79196_i0 | PRJNA1160211 | 80413 | 497 | 11.65566 | 57.9286302 | Candidatus Altimarinota bacterium | 2044595 | Bacteria | Bacteria | 140 | 7.199999999999999e-38 | NR | MBP7806433.1 | 2044595 | g79196 | i0 | 57.6 | 0.796780684104628 | 132 | 56 | 79.7 | 0 | 474 | 79 | 15 | 146 | MBP7806433.1 hypothetical protein [Candidatus Altimarinota bacterium] | diamond | 396 | 140 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Altimarinota | Candidatus Altimarinota bacterium | ||||||
| 30956886 | 30956886 | PRJNA1160211_S_NODE_75934_length_507_cov_21.481567_g74720_i0 | PRJNA1160211 | 75934 | 507 | 21.481567 | 108.91154469 | Candidatus Altimarinota bacterium | 2044595 | Bacteria | Bacteria | 218 | 1.05e-63 | NR | MFN7160311.1 | 2044595 | g74720 | i0 | 75.2 | 1.63905325443787 | 137 | 34 | 81.1 | 0 | 493 | 83 | 62 | 198 | MFN7160311.1 ATP-binding cassette domain-containing protein [Candidatus Altimarinota bacterium] | diamond | 831 | 218 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Altimarinota | Candidatus Altimarinota bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;