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contig_metadata

25 rows where analysis = "diamond", bioproject = "PRJNA1160211" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 25 ✖

bioproject 1

  • PRJNA1160211 · 25 ✖

analysis 1

  • diamond · 25 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4137162 4137162 PRJNA1160211_S_NODE_287504_length_235_cov_3.604938_g286271_i0 PRJNA1160211 287504 235 3.604938 8.4716043 Candidatus Gracilibacteria bacterium GN 2044595 Bacteria Bacteria 144 1.97e-41   NR RAL56550.1 1914866 g286271 i0 98.6 0.94468085106383 74 1 94.5 0 2 223 41 114 RAL56550.1 ATP-dependent Clp protease proteolytic subunit [Candidatus Gracilibacteria bacterium GN02-873] diamond 222 144 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium GN02-873
26819019 26819019 PRJNA1160211_S_NODE_169461_length_348_cov_2.240000_g168228_i0 PRJNA1160211 169461 348 2.24 7.7952 candidate division SR1 bacterium 2044938 Bacteria Bacteria 107 2.07e-26   NR PZM85710.1 2044938 g168228 i0 82.8 0.551724137931034 64 11 55.2 0 346 155 125 188 PZM85710.1 MAG: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG [candidate division SR1 bacterium] diamond 192 107 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium
27071958 27071958 PRJNA1160211_S_NODE_145902_length_380_cov_14.136808_g144669_i0 PRJNA1160211 145902 380 14.136808 53.7198704 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 72 9.41e-12   NR HEY5668337.1 2973664 g144669 i0 40 0.907894736842105 115 63 89.2 4 41 379 286 396 HEY5668337.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 345 72 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
27103484 27103484 PRJNA1160211_S_NODE_117882_length_425_cov_2.363636_g116653_i0 PRJNA1160211 117882 425 2.363636 10.045453 Patescibacteria group bacterium 2052139 Bacteria Bacteria 61.2 7.12e-8   NR MCL4419288.1 2052139 g116653 i0 45 0.423529411764706 60 31 40.9 1 14 187 265 324 MCL4419288.1 hypothetical protein [Patescibacteria group bacterium] diamond 180 61.2 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
27640844 27640844 PRJNA1160211_S_NODE_134424_length_398_cov_3.196923_g133192_i0 PRJNA1160211 134424 398 3.196923 12.72375354 Patescibacteria group bacterium 2052139 Bacteria Bacteria 235 1.39e-74   NR MDQ5982026.1 2052139 g133192 i0 92.3 1.91457286432161 130 10 98 0 390 1 109 238 MDQ5982026.1 hypothetical protein [Patescibacteria group bacterium] diamond 762 235 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
27956485 27956485 PRJNA1160211_S_NODE_283885_length_240_cov_4.724551_g282652_i0 PRJNA1160211 283885 240 4.724551 11.3389224 Candidatus Babelota bacterium 2030827 Bacteria Bacteria 89.4 4.01e-20   NR MCA9770424.1 2030827 g282652 i0 68.8 3.2 64 20 80 0 31 222 1 64 MCA9770424.1 glycerol-3-phosphate 1-O-acyltransferase PlsY [Candidatus Dependentiae bacterium] diamond 768 89.4 1 Bacteria Bacteria candidate phyla             Candidatus Babelota bacterium
28240407 28240407 PRJNA1160211_S_NODE_251646_length_260_cov_4.197861_g250413_i0 PRJNA1160211 251646 260 4.197861 10.9144386 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 43.1 0.0148   NR HZP42555.1 2838779 g250413 i0 43.3 0.692307692307692 60 30 64.6 1 44 211 34 93 HZP42555.1 hypothetical protein [Candidatus Binatia bacterium] diamond 180 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
28366740 28366740 PRJNA1160211_S_NODE_248066_length_263_cov_4.505263_g246833_i0 PRJNA1160211 248066 263 4.505263 11.84884169 Candidatus Rokubacteria bacterium 13_1_4 1805364 Bacteria Bacteria 42.7 0.0488   NR OLC37889.1 1805364 g246833 i0 29.8 0.958174904942966 84 55 91.3 1 23 262 71 154 OLC37889.1 MAG: hypothetical protein AUH81_05385 [Candidatus Rokubacteria bacterium 13_1_40CM_4_69_5] diamond 252 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokubacteria bacterium 13_1_40CM_4_69_5
28417955 28417955 PRJNA1160211_S_NODE_108746_length_441_cov_2.076087_g107518_i0 PRJNA1160211 108746 441 2.076087 9.15554367 Bacteria 2 Bacteria Bacteria 182 1.79e-50   NR MCH8518297.1 2044595 g107518 i0 67.9 11.6598639455782 134 40 91.2 2 3 404 429 559 MCH8518297.1 DEAD/DEAH box helicase family protein [Candidatus Altimarinota bacterium] diamond 5142 183 0.994535519125683 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
28493269 28493269 PRJNA1160211_S_NODE_224067_length_285_cov_3.981132_g222834_i0 PRJNA1160211 224067 285 3.981132 11.3462262 Candidatus Moranbacteria bacterium RIFCSPHIGHO2_ 1801637 Bacteria Bacteria 140 2.3699999999999998e-40   NR OGI16210.1 1801637 g222834 i0 76.3 0.978947368421053 93 22 97.9 0 283 5 7 99 OGI16210.1 MAG: hypothetical protein A2878_02500 [Candidatus Moranbacteria bacterium RIFCSPHIGHO2_01_FULL_54_31] diamond 279 140 1 Bacteria Bacteria candidate phyla   Candidatus Moraniibacteriota         Candidatus Moranbacteria bacterium RIFCSPHIGHO2_01_FULL_54_31
28556525 28556525 PRJNA1160211_S_NODE_8447_length_846_cov_3.507115_g7733_i0 PRJNA1160211 8447 846 3.507115 29.6701929 Candidatus Hydrothermia bacterium 3014280 Bacteria Bacteria 65.1 8.26e-8   NR HOL24546.1 3014280 g7733 i0 53.3 0.212765957446809 60 28 21.3 0 842 663 30 89 HOL24546.1 tetratricopeptide repeat protein [Candidatus Hydrothermia bacterium] diamond 180 65.1 1 Bacteria Bacteria candidate phyla   Candidatus Hydrothermota Candidatus Hydrothermia       Candidatus Hydrothermia bacterium
29503398 29503398 PRJNA1160211_S_NODE_13870_length_763_cov_8.531884_g12992_i0 PRJNA1160211 13870 763 8.531884 65.09827492 Candidatus Staskawiczbacteria bacterium 2053617 Bacteria Bacteria 62.4 3.78e-7   NR MBM3206812.1 2053617 g12992 i0 31.2 0.73132372214941 186 113 69.6 6 119 649 212 391 MBM3206812.1 hypothetical protein [Candidatus Staskawiczbacteria bacterium] diamond 558 62.4 1 Bacteria Bacteria candidate phyla   Candidatus Staskawicziibacteriota         Candidatus Staskawiczbacteria bacterium
29522825 29522825 PRJNA1160211_S_NODE_8530_length_844_cov_13.630350_g7811_i0 PRJNA1160211 8530 844 13.63035 115.040154 Candidatus Saccharimonadota 95818 Bacteria Bacteria 310 8.219999999999999e-95   NR WP_129693651.1 1986206 g7811 i0 99.4 1.09478672985782 154 1 54.7 0 3 464 319 472 WP_129693651.1 TraM recognition domain-containing protein [Candidatus Nanosynsacchari sp. TM7_ANC_38.39_G1_1] diamond 924 310 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Nanosynsacchari Candidatus Nanosynsacchari sp. TM7_ANC_38.39_G1_1
29629499 29629499 PRJNA1160211_S_NODE_84510_length_488_cov_67.865060_g83291_i0 PRJNA1160211 84510 488 67.86506 331.1814928 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 129 3.2099999999999996e-31   NR RKW24136.1 2044595 g83291 i0 100 0.418032786885246 68 0 41.8 0 101 304 709 776 RKW24136.1 MAG: DUF5011 domain-containing protein [Candidatus Altimarinota bacterium] diamond 204 129 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30545964 30545964 PRJNA1160211_S_NODE_80413_length_497_cov_11.655660_g79196_i0 PRJNA1160211 80413 497 11.65566 57.9286302 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 140 7.199999999999999e-38   NR MBP7806433.1 2044595 g79196 i0 57.6 0.796780684104628 132 56 79.7 0 474 79 15 146 MBP7806433.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 396 140 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30577287 30577287 PRJNA1160211_S_NODE_205253_length_305_cov_1.495690_g204020_i0 PRJNA1160211 205253 305 1.49569 4.5618545 Candidatus Levyibacteriota bacterium 2052151 Bacteria Bacteria 105 1.97e-26   NR MBI4098013.1 2052151 g204020 i0 70.7 1.61311475409836 82 24 80.7 0 246 1 1 82 MBI4098013.1 50S ribosomal protein L22 [Candidatus Levyibacteriota bacterium] diamond 492 105 1 Bacteria Bacteria candidate phyla   Candidatus Levyibacteriota         Candidatus Levyibacteriota bacterium
30956886 30956886 PRJNA1160211_S_NODE_75934_length_507_cov_21.481567_g74720_i0 PRJNA1160211 75934 507 21.481567 108.91154469 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 218 1.05e-63   NR MFN7160311.1 2044595 g74720 i0 75.2 1.63905325443787 137 34 81.1 0 493 83 62 198 MFN7160311.1 ATP-binding cassette domain-containing protein [Candidatus Altimarinota bacterium] diamond 831 218 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
31145798 31145798 PRJNA1160211_S_NODE_185735_length_327_cov_5.291339_g184502_i0 PRJNA1160211 185735 327 5.291339 17.30267853 Candidatus Dojkabacteria bacterium 2099670 Bacteria Bacteria 118 3.0199999999999997e-32   NR HRN86952.1 2099670 g184502 i0 98.2 0.513761467889908 56 1 51.4 0 23 190 38 93 HRN86952.1 hypothetical protein [Candidatus Dojkabacteria bacterium] diamond 168 118 1 Bacteria Bacteria candidate phyla             Candidatus Dojkabacteria bacterium
31335843 31335843 PRJNA1160211_S_NODE_166496_length_352_cov_2.444444_g165263_i0 PRJNA1160211 166496 352 2.444444 8.60444288 Candidatus Shapirobacteria bacterium CG11_big_fil_rev_8_21_14_ 2053613 Bacteria Bacteria 74.7 6.23e-13   NR PIQ70456.1 1974889 g165263 i0 50 3.60511363636364 76 38 64.8 0 15 242 300 375 PIQ70456.1 MAG: RNA polymerase sigma factor RpoD [Candidatus Shapirobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_40_12] diamond 1269 74.7 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_40_12
31367813 31367813 PRJNA1160211_S_NODE_274976_length_245_cov_1.343023_g273743_i0 PRJNA1160211 274976 245 1.343023 3.29040635 Minisyncoccales bacterium 3122025 Bacteria Bacteria 87.8 5.22e-19   NR MFI5205698.1 3122025 g273743 i0 56.1 0.808163265306122 66 29 80.8 0 209 12 79 144 MFI5205698.1 hypothetical protein [Minisyncoccales bacterium] diamond 198 87.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota Minisyncoccia Minisyncoccales     Minisyncoccales bacterium
31557632 31557632 PRJNA1160211_S_NODE_97036_length_463_cov_3.592308_g95811_i0 PRJNA1160211 97036 463 3.592308 16.63238604 Patescibacteria group bacterium 2052139 Bacteria Bacteria 92 1.54e-18   NR MEK7617840.1 2052139 g95811 i0 83.3 0.719222462203024 54 9 35 0 300 461 319 372 MEK7617840.1 pilin [Patescibacteria group bacterium] diamond 333 92 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31892952 31892952 PRJNA1160211_S_NODE_179797_length_334_cov_13.977011_g178564_i0 PRJNA1160211 179797 334 13.977011 46.68321674 Candidatus Saccharimonadaceae 2171986 Bacteria Bacteria 58.2 2.93e-8   NR MFC2602170.1 1917697 g178564 i0 40.5 1.31137724550898 84 46 72.8 3 77 319 1 83 MFC2602170.1 hypothetical protein [Candidatus Saccharimonas sp.] diamond 438 58.2 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
32348517 32348517 PRJNA1160211_S_NODE_112439_length_434_cov_5.900277_g111210_i0 PRJNA1160211 112439 434 5.900277 25.60720218 Candidatus Babelota bacterium 2030827 Bacteria Bacteria 145 7.61e-38   NR MCX5922360.1 2030827 g111210 i0 53.3 0.933179723502304 135 63 93.3 0 3 407 104 238 MCX5922360.1 AAA family ATPase [Candidatus Dependentiae bacterium] diamond 405 145 1 Bacteria Bacteria candidate phyla             Candidatus Babelota bacterium
32506688 32506688 PRJNA1160211_S_NODE_182719_length_331_cov_2.410853_g181486_i0 PRJNA1160211 182719 331 2.410853 7.97992343 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 63.2 4.91e-9   NR HMM62033.1 2026720 g181486 i0 31.2 0.987915407854985 109 72 97 2 9 329 191 298 HMM62033.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 327 63.2 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
32746469 32746469 PRJNA1160211_S_NODE_25620_length_675_cov_2.214286_g24549_i0 PRJNA1160211 25620 675 2.214286 14.9464305 Pseudomonadati 3379134 Bacteria Bacteria 54.3 1.44e-4   NR HEX3409069.1 2785449 g24549 i0 71.9 1.04 32 9 14.2 0 2 97 527 558 HEX3409069.1 multicopper oxidase domain-containing protein [Candidatus Binataceae bacterium] diamond 702 54.3 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;