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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA1159911" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 7 ✖

bioproject 1

  • PRJNA1159911 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27008555 27008555 PRJNA1159911_P_NODE_66702_length_291_cov_2.550459_g66160_i0 PRJNA1159911 66702 291 2.550459 7.42183569 uncultured virus 340016 Viruses Viruses 43.1 0.0373   NR AUM61873.1 340016 g66160 i0 38 0.515463917525773 50 31 51.5 0 165 16 37 86 AUM61873.1 capsid [uncultured virus] diamond 150 43.1 1 Viruses               uncultured virus
27324909 27324909 PRJNA1159911_P_NODE_65843_length_294_cov_1.036199_g65301_i0 PRJNA1159911 65843 294 1.036199 3.04642506 Halorubrum phage Hardycor1 2793710 Viruses Viruses 71.2 6.42e-12   NR QPL12245.1 2793710 g65301 i0 41.9 1.95918367346939 93 54 94.9 0 290 12 312 404 QPL12245.1 tape measure protein [Halorubrum phage Hardycor1] diamond 576 71.2 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes Kirjokansivirales Graaviviridae   Halorubrum phage Hardycor1
29806895 29806895 PRJNA1159911_P_NODE_58251_length_316_cov_1.901235_g57709_i0 PRJNA1159911 58251 316 1.901235 6.0079026 root 1 Root_unresolved Root_unresolved 110 2.54e-26   NR APU89272.1 1924547 g57709 i0 67 1.65189873417722 88 28 83.5 1 264 1 299 385 APU89272.1 integrase-like protein [Virus Rctr16k] diamond 522 111 0.990990990990991 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Virus Rctr16k
29819059 29819059 PRJNA1159911_P_NODE_58651_length_315_cov_1.272727_g58109_i0 PRJNA1159911 58651 315 1.272727 4.00909005 Haloarcula phage HCTV-7 2877982 Viruses Viruses 45.8 0.00693   NR UBF20348.1 2877982 g58109 i0 47.8 0.657142857142857 69 33 64.8 3 272 69 518 584 UBF20348.1 tail tape measure protein [Haloarcula phage HCTV-7] diamond 207 45.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes Thumleimavirales Hafunaviridae Haloferacalesvirus Haloferacalesvirus hv5
30185995 30185995 PRJNA1159911_P_NODE_59132_length_313_cov_2.104167_g58590_i0 PRJNA1159911 59132 313 2.104167 6.58604271 root 1 Root_unresolved Root_unresolved 45.1 0.0107   NR QBK88018.1 2506606 g58590 i0 42.9 1.62939297124601 42 24 40.3 0 308 183 87 128 QBK88018.1 MAG: high mobility group box [Marseillevirus LCMAC202] diamond 510 45.1 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Marseilleviridae   Marseillevirus LCMAC202
31652054 31652054 PRJNA1159911_P_NODE_97217_length_243_cov_9.147059_g96675_i0 PRJNA1159911 97217 243 9.147059 22.22735337 Caudoviricetes sp. 2832643 Viruses Viruses 41.2 0.0115   NR DAJ33774.1 2832643 g96675 i0 57.6 0.407407407407407 33 13 40.7 1 87 185 2 33 DAJ33774.1 MAG TPA: hypothetical protein [Caudoviricetes sp.] diamond 99 41.2 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
31778675 31778675 PRJNA1159911_P_NODE_30237_length_489_cov_1.867788_g29697_i0 PRJNA1159911 30237 489 1.867788 9.13348332 Qianjiang dicistro-like virus 65 3347480 Viruses Viruses 47.8 0.00752   NR XHA87832.1 3347480 g29697 i0 38.7 1.06748466257669 93 39 54 4 225 488 552 631 XHA87832.1 MAG: putative viral coat protein [Qianjiang dicistro-like virus 65] diamond 522 47.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Qianjiang dicistro-like virus 65

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;