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contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJNA1159911" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 13 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1159911 · 13 ✖

analysis 1

  • diamond · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6686223 6686223 PRJNA1159911_P_NODE_6946_length_1303_cov_8.297561_g6624_i0 PRJNA1159911 6946 1303 8.297561 108.11721983 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 426 7.499999999999997e-145   NR RYD65414.1 2026800 g6624 i0 75.9 0.649270913277053 282 65 64.7 2 301 1143 56 335 RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium] diamond 846 426 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
7415915 7415915 PRJNA1159911_P_NODE_7106_length_1286_cov_4.079143_g6778_i0 PRJNA1159911 7106 1286 4.079143 52.45777898 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 434 5.579999999999998e-148   NR RYD65414.1 2026800 g6778 i0 76.3 0.660186625194401 283 65 66 1 1058 210 56 336 RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium] diamond 849 434 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
19434300 19434300 PRJNA1159911_P_NODE_6736_length_1329_cov_4.105096_g6417_i0 PRJNA1159911 6736 1329 4.105096 54.55672584 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 289 1.45e-90   NR RYD71398.1 2026800 g6417 i0 44.8 0.801354401805869 355 183 78.8 6 82 1128 14 361 RYD71398.1 MAG: hypothetical protein EOP84_24945, partial [Verrucomicrobiaceae bacterium] diamond 1065 289 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
27261744 27261744 PRJNA1159911_P_NODE_93963_length_246_cov_0.890173_g93421_i0 PRJNA1159911 93963 246 0.890173 2.18982558 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 51.6 2.8e-5   NR MFN2474974.1 2201154 g93421 i0 40 1.86585365853659 75 39 91.5 3 6 230 147 215 MFN2474974.1 matrixin family metalloprotease [Chthoniobacterales bacterium] diamond 459 51.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
27988027 27988027 PRJNA1159911_P_NODE_62945_length_302_cov_0.886463_g62403_i0 PRJNA1159911 62945 302 0.886463 2.67711826 Limisphaerales bacterium 2052186 Bacteria Bacteria 149 2.9e-39   NR MEQ2007490.1 2052186 g62403 i0 67.7 0.983443708609272 99 31 98.3 1 298 2 1018 1115 MEQ2007490.1 N-6 DNA methylase [Limisphaerales bacterium] diamond 297 149 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Limisphaerales     Limisphaerales bacterium
28588047 28588047 PRJNA1159911_P_NODE_33547_length_455_cov_1.722513_g33006_i0 PRJNA1159911 33547 455 1.722513 7.83743415 Opitutia bacterium 2026771 Bacteria Bacteria 130 4.96e-32   NR MBI5423982.1 2026771 g33006 i0 45.9 2.25494505494505 170 56 88.4 1 43 444 55 224 MBI5423982.1 M13 family metallopeptidase [Opitutia bacterium] diamond 1026 130 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia       Opitutia bacterium
28777203 28777203 PRJNA1159911_P_NODE_25187_length_555_cov_1.549793_g24650_i0 PRJNA1159911 25187 555 1.549793 8.60135115 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 285 3.82e-93   NR RYD81270.1 2026800 g24650 i0 69.2 1.98378378378378 182 56 98.4 0 555 10 148 329 RYD81270.1 MAG: hypothetical protein EOP84_11265, partial [Verrucomicrobiaceae bacterium] diamond 1101 285 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
28840364 28840364 PRJNA1159911_P_NODE_103008_length_233_cov_2.431250_g102466_i0 PRJNA1159911 103008 233 2.43125 5.6648125 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 89.4 5.85e-19   NR RYD71398.1 2026800 g102466 i0 58.9 0.939914163090129 73 30 94 0 221 3 196 268 RYD71398.1 MAG: hypothetical protein EOP84_24945, partial [Verrucomicrobiaceae bacterium] diamond 219 89.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
28871941 28871941 PRJNA1159911_P_NODE_86648_length_251_cov_1.724719_g86106_i0 PRJNA1159911 86648 251 1.724719 4.32904469 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 153 6.459999999999998e-42   NR HEY3600888.1 2201154 g86106 i0 94 3.9681274900398402 83 5 99.2 0 251 3 101 183 HEY3600888.1 Rne/Rng family ribonuclease [Chthoniobacterales bacterium] diamond 996 153 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
30154218 30154218 PRJNA1159911_P_NODE_101492_length_241_cov_0.916667_g100950_i0 PRJNA1159911 101492 241 0.916667 2.20916747 PVC group 1783257 Bacteria Bacteria 124 1.31e-32   NR HUF40714.1 2499141 g100950 i0 78.2 5.850622406639 78 17 97.1 0 236 3 138 215 HUF40714.1 homocysteine S-methyltransferase family protein [Verrucomicrobiia bacterium] diamond 1410 125 0.992 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
30672183 30672183 PRJNA1159911_P_NODE_80393_length_262_cov_1.407407_g79851_i0 PRJNA1159911 80393 262 1.407407 3.68740634 Opitutia bacterium 2026771 Bacteria Bacteria 161 1.6999999999999996e-47   NR MBI2814291.1 2026771 g79851 i0 96.5 0.984732824427481 86 3 98.5 0 3 260 100 185 MBI2814291.1 flagellar hook basal-body protein [Opitutia bacterium] diamond 258 161 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia       Opitutia bacterium
31083071 31083071 PRJNA1159911_P_NODE_95215_length_245_cov_0.895349_g94673_i0 PRJNA1159911 95215 245 0.895349 2.19360505 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 162 1.68e-45   NR HXD00327.1 2499141 g94673 i0 96.3 4.95918367346939 81 3 99.2 0 3 245 189 269 HXD00327.1 NADH-quinone oxidoreductase subunit M [Verrucomicrobiia bacterium] diamond 1215 162 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
31462680 31462680 PRJNA1159911_P_NODE_52256_length_338_cov_1.562264_g51714_i0 PRJNA1159911 52256 338 1.562264 5.28045232 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 75.5 1.54e-13   NR MCD8534895.1 2026799 g51714 i0 64.6 1.27810650887574 48 17 42.6 0 338 195 242 289 MCD8534895.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 432 75.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;