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contig_metadata

23 rows where analysis = "diamond", bioproject = "PRJNA1158727" and tax_phylum = "Oomycota"

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tax_superkingdom 1

tax_phylum 1

  • Oomycota · 23 ✖

tax_clade 1

bioproject 1

  • PRJNA1158727 · 23 ✖

analysis 1

  • diamond · 23 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2855429 2855429 PRJNA1158727_P_NODE_16823_length_1231_cov_6.658895_g12415_i0 PRJNA1158727 16823 1231 6.658895 81.97099745 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 577 7.6e-204   NR TMW60420.1 41045 g12415 i0 72.2 4.7229894394801 388 107 94.6 1 27 1190 1 387 TMW60420.1 hypothetical protein Poli38472_000462 [Pythium oligandrum] diamond 5814 580 0.994827586206897 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
6681398 6681398 PRJNA1158727_P_NODE_121186_length_266_cov_1.357513_g113725_i0 PRJNA1158727 121186 266 1.357513 3.6109845800000002 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 87 5.27e-18   NR DBA03690.1 4803 g113725 i0 58 9.81203007518797 81 32 89.1 1 29 265 228 308 DBA03690.1 TPA: hypothetical protein N0F65_004107 [Lagenidium giganteum] diamond 2610 87.8 0.990888382687927 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
11784612 11784612 PRJNA1158727_P_NODE_61570_length_416_cov_1.903790_g54109_i0 PRJNA1158727 61570 416 1.90379 7.9197664 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 159 1.1e-46   NR DBA01302.1 4803 g54109 i0 59.4 3.76442307692308 133 48 92.3 2 2 385 51 182 DBA01302.1 TPA: hypothetical protein N0F65_001807 [Lagenidium giganteum] diamond 1566 160 0.99375 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
20163970 20163970 PRJNA1158727_P_NODE_163956_length_241_cov_0.916667_g156494_i0 PRJNA1158727 163956 241 0.916667 2.20916747 Saprolegniales 4763 SAR_Eukaryotes SAR_Eukaryotes 67.4 1.09e-11   NR RHY92071.1 112090 g156494 i0 86.8 2.83817427385892 38 5 47.3 0 114 1 58 95 RHY92071.1 hypothetical protein DYB35_003480 [Aphanomyces astaci] diamond 684 67.4 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
24529360 24529360 PRJNA1158727_P_NODE_113960_length_274_cov_2.084577_g106499_i0 PRJNA1158727 113960 274 2.084577 5.71174098 Nothophytophthora sp. Chile5 2483409 SAR_Eukaryotes SAR_Eukaryotes 157 1.7599999999999998e-46   NR RLN90219.1 2483409 g106499 i0 87.8 15.4270072992701 82 10 89.8 0 4 249 121 202 RLN90219.1 hypothetical protein BBJ28_00016662 [Nothophytophthora sp. Chile5] diamond 4227 157 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Nothophytophthora Nothophytophthora sp. Chile5
26628747 26628747 PRJNA1158727_P_NODE_139841_length_249_cov_1.590909_g132379_i0 PRJNA1158727 139841 249 1.590909 3.96136341 Phytophthora ramorum 164328 SAR_Eukaryotes SAR_Eukaryotes 77.8 1.92e-14   NR KAL4169058.1 164328 g132379 i0 50.6 2 83 41 100 0 249 1 1202 1284 KAL4169058.1 hypothetical protein KRP22_009987 [Phytophthora ramorum] diamond 498 77.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora ramorum
26806521 26806521 PRJNA1158727_P_NODE_157861_length_243_cov_0.905882_g150399_i0 PRJNA1158727 157861 243 0.905882 2.20129326 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 59.7 3.75e-8   NR OWZ20808.1 4795 g150399 i0 59.2 3.02469135802469 49 20 60.5 0 240 94 316 364 OWZ20808.1 hypothetical protein PHMEG_0004745 [Phytophthora megakarya] diamond 735 60.1 0.993344425956739 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora megakarya
27388185 27388185 PRJNA1158727_P_NODE_152203_length_245_cov_0.895349_g144741_i0 PRJNA1158727 152203 245 0.895349 2.19360505 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 119 3.58e-30   NR KAH9109352.1 100861 g144741 i0 67.1 0.96734693877551 79 26 96.7 0 3 239 177 255 KAH9109352.1 hypothetical protein AeMF1_015537 [Aphanomyces euteiches] diamond 237 119 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
27419835 27419835 PRJNA1158727_P_NODE_16683_length_1237_cov_4.377148_g12314_i0 PRJNA1158727 16683 1237 4.377148 54.14532076 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 448 1.8199999999999994e-153   NR GLE01825.1 114742 g12314 i0 59.5 11.4882780921584 365 142 88 3 16 1104 8 368 GLE01825.1 hypothetical protein PINS_up010663 [Pythium insidiosum] diamond 14211 448 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
27849230 27849230 PRJNA1158727_P_NODE_147244_length_247_cov_0.885057_g139782_i0 PRJNA1158727 147244 247 0.885057 2.18609079 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 102 3.88e-23   NR DBA05234.1 4803 g139782 i0 57.3 32.7570850202429 82 34 98.4 1 3 245 1229 1310 DBA05234.1 TPA: hypothetical protein N0F65_007396 [Lagenidium giganteum] diamond 8091 103 0.990291262135922 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
28070391 28070391 PRJNA1158727_P_NODE_50345_length_497_cov_2.983491_g42890_i0 PRJNA1158727 50345 497 2.983491 14.82795027 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 161 6.65e-43   NR XP_024573476.1 4781 g42890 i0 64.7 8.25150905432596 116 41 70 0 477 130 533 648 XP_024573476.1 dead deah box helicase [Plasmopara halstedii] diamond 4101 162 0.993827160493827 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
28208748 28208748 PRJNA1158727_P_NODE_103786_length_287_cov_1.537383_g96325_i0 PRJNA1158727 103786 287 1.537383 4.41228921 Thraustotheca clavata 74557 SAR_Eukaryotes SAR_Eukaryotes 122 6.83e-30   NR OQR89707.1 74557 g96325 i0 62.9 22.9024390243902 97 34 99.3 1 285 1 52 148 OQR89707.1 60S acidic ribosomal protein P0, partial [Thraustotheca clavata] diamond 6573 122 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
28449489 28449489 PRJNA1158727_P_NODE_136126_length_251_cov_0.865169_g128664_i0 PRJNA1158727 136126 251 0.865169 2.17157419 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 106 8.640000000000001e-27   NR XP_009830926.1 112090 g128664 i0 65.8 6.63346613545817 79 26 94.4 1 14 250 6 83 XP_009830926.1 hypothetical protein, variant [Aphanomyces astaci] diamond 1665 106 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
28682754 28682754 PRJNA1158727_P_NODE_42367_length_585_cov_1.996094_g34960_i0 PRJNA1158727 42367 585 1.996094 11.6771499 Thraustotheca clavata 74557 SAR_Eukaryotes SAR_Eukaryotes 266 1.6e-83   NR OQS07615.1 74557 g34960 i0 69 1.88717948717949 184 56 93.8 1 584 36 324 507 OQS07615.1 thioredoxin reductase [Thraustotheca clavata] diamond 1104 266 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
28871897 28871897 PRJNA1158727_P_NODE_120748_length_266_cov_2.046632_g113287_i0 PRJNA1158727 120748 266 2.046632 5.44404112 Lagenidium giganteum 4803 SAR_Eukaryotes SAR_Eukaryotes 105 5.9699999999999996e-24   NR DAZ99415.1 4803 g113287 i0 58.6 0.981203007518797 87 36 98.1 0 265 5 4915 5001 DAZ99415.1 TPA: hypothetical protein N0F65_004048 [Lagenidium giganteum] diamond 261 105 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
28998659 28998659 PRJNA1158727_P_NODE_86548_length_322_cov_1.044177_g79087_i0 PRJNA1158727 86548 322 1.044177 3.36224994 Saprolegnia parasitica CBS 223.65 695850 SAR_Eukaryotes SAR_Eukaryotes 46.2 0.00562   NR XP_012200150.1 695850 g79087 i0 37.9 0.885093167701863 95 51 85.7 4 18 293 847 936 XP_012200150.1 hypothetical protein SPRG_19925 [Saprolegnia parasitica CBS 223.65] diamond 285 46.2 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
29850926 29850926 PRJNA1158727_P_NODE_71811_length_367_cov_1.761905_g64350_i0 PRJNA1158727 71811 367 1.761905 6.46619135 Hyaloperonospora brassicae 162125 SAR_Eukaryotes SAR_Eukaryotes 137 4.28e-36   NR CAI5735026.1 162125 g64350 i0 55.3 7.01362397820164 123 51 98.1 3 365 6 195 316 CAI5735026.1 unnamed protein product [Hyaloperonospora brassicae] diamond 2574 137 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Hyaloperonospora Hyaloperonospora brassicae
30925272 30925272 PRJNA1158727_P_NODE_99274_length_294_cov_1.398190_g91813_i0 PRJNA1158727 99274 294 1.39819 4.1106786 Lagenidium giganteum 4803 SAR_Eukaryotes SAR_Eukaryotes 104 1.47e-23   NR DAZ93677.1 4803 g91813 i0 57.7 4.93877551020408 97 39 96.9 2 6 290 225 321 DAZ93677.1 TPA: hypothetical protein N0F65_008185 [Lagenidium giganteum] diamond 1452 104 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
31418480 31418480 PRJNA1158727_P_NODE_160776_length_242_cov_0.911243_g153314_i0 PRJNA1158727 160776 242 0.911243 2.20520806 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 118 7.11e-29   NR OQR82163.1 74557 g153314 i0 73.8 8.90082644628099 80 21 99.2 0 2 241 507 586 OQR82163.1 hsp70 [Thraustotheca clavata] diamond 2154 118 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
31734663 31734663 PRJNA1158727_P_NODE_142657_length_248_cov_1.457143_g135195_i0 PRJNA1158727 142657 248 1.457143 3.61371464 root 1 Root_unresolved Root_unresolved 121 2.8199999999999996e-32   NR ETO99862.1 1317063 g135195 i0 69.5 1.98387096774194 82 25 99.2 0 247 2 131 212 ETO99862.1 hypothetical protein F441_22714, partial [Phytophthora nicotianae CJ01A1] diamond 492 121 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
31968435 31968435 PRJNA1158727_P_NODE_140738_length_249_cov_0.875000_g133276_i0 PRJNA1158727 140738 249 0.875 2.17875 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 48.1 3.21e-5   NR OQR83813.1 1202772 g133276 i0 55.1 0.590361445783133 49 22 59 0 247 101 1 49 OQR83813.1 hypothetical protein ACHHYP_14256 [Achlya hypogyna] diamond 147 48.1 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
32126925 32126925 PRJNA1158727_P_NODE_159838_length_242_cov_0.911243_g152376_i0 PRJNA1158727 159838 242 0.911243 2.20520806 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 49.7 1.26e-4   NR XP_067800973.1 4785 g152376 i0 37.5 0.793388429752066 64 40 79.3 0 203 12 322 385 XP_067800973.1 Superoxide-generating NADPH oxidase heavy chain subunit A [Phytophthora cinnamomi] diamond 192 49.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
32714884 32714884 PRJNA1158727_P_NODE_103320_length_288_cov_1.195349_g95859_i0 PRJNA1158727 103320 288 1.195349 3.44260512 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 103 3.2000000000000003e-23   NR KAH9103331.1 100861 g95859 i0 52 3.9375 100 34 92.7 3 283 17 446 542 KAH9103331.1 hypothetical protein AeMF1_020311 [Aphanomyces euteiches] diamond 1134 104 0.990384615384615 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;