RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1158727" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1158727 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5406787 5406787 PRJNA1158727_P_NODE_12885_length_1434_cov_5.044820_g9421_i0 PRJNA1158727 12885 1434 5.04482 72.3427188 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 695 8.699999999999998e-249   NR MES1909605.1 1215613 g9421 i0 77.1 5.54602510460251 433 99 90.6 0 1423 125 1 433 MES1909605.1 hypothetical protein [Cercozoa sp. M6MM] diamond 7953 701 0.991440798858773 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
14335131 14335131 PRJNA1158727_P_NODE_70752_length_371_cov_2.493289_g63291_i0 PRJNA1158727 70752 371 2.493289 9.25010219 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 169 1.01e-50   NR MES1910907.1 1215613 g63291 i0 66.7 1.98921832884097 123 41 99.5 0 371 3 1 123 MES1910907.1 hypothetical protein [Cercozoa sp. M6MM] diamond 738 169 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
26692078 26692078 PRJNA1158727_P_NODE_158961_length_242_cov_1.751479_g151499_i0 PRJNA1158727 158961 242 1.751479 4.23857918 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 115 2.72e-29   NR MES1907458.1 1215613 g151499 i0 68.8 0.991735537190083 80 25 99.2 0 1 240 31 110 MES1907458.1 hypothetical protein [Cercozoa sp. M6MM] diamond 240 115 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;