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contig_metadata

15 rows where analysis = "diamond", bioproject = "PRJNA1156092" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 15 ✖

bioproject 1

  • PRJNA1156092 · 15 ✖

analysis 1

  • diamond · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9230953 9230953 PRJNA1156092_P_NODE_31588_length_242_cov_0.911243_g31458_i0 PRJNA1156092 31588 242 0.911243 2.20520806 Thermoplasmata archaeon 1906666 Archaea Archaea 134 1.59e-34   NR MCD6461348.1 1906666 g31458 i0 82.3 2.90082644628099 79 14 97.9 0 241 5 79 157 MCD6461348.1 DNA topoisomerase (ATP-hydrolyzing) subunit B [Thermoplasmata archaeon] diamond 702 134 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
26628718 26628718 PRJNA1156092_P_NODE_29041_length_244_cov_0.900585_g28911_i0 PRJNA1156092 29041 244 0.900585 2.1974274 Promethearchaeota archaeon 2053489 Archaea Archaea 138 7.1699999999999995e-37   NR MBD3351434.1 2053489 g28911 i0 81 0.971311475409836 79 15 97.1 0 242 6 77 155 MBD3351434.1 hypothetical protein [Promethearchaeota archaeon] diamond 237 138 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
26660124 26660124 PRJNA1156092_P_NODE_31001_length_242_cov_0.911243_g30871_i0 PRJNA1156092 31001 242 0.911243 2.20520806 Nitrosopumilus sp. 2024843 Archaea Archaea 151 1.4e-45   NR MDH3617759.1 2024843 g30871 i0 95 0.991735537190083 80 4 99.2 0 2 241 11 90 MDH3617759.1 hypothetical protein [Nitrosopumilus sp.] diamond 240 151 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
26787238 26787238 PRJNA1156092_P_NODE_26081_length_247_cov_0.885057_g25951_i0 PRJNA1156092 26081 247 0.885057 2.18609079 archaeon 1906665 Archaea Archaea 50.1 8.11e-5   NR NDB56545.1 1906665 g25951 i0 36.2 0.838056680161943 69 44 83.8 0 218 12 6 74 NDB56545.1 hypothetical protein [archaeon] diamond 207 50.1 1 Archaea               archaeon
27008485 27008485 PRJNA1156092_P_NODE_32542_length_241_cov_0.916667_g32412_i0 PRJNA1156092 32542 241 0.916667 2.20916747 Halohasta salina 2961621 Archaea Archaea 45.4 0.00401   NR WP_253737137.1 2961621 g32412 i0 48.7 0.485477178423237 39 20 48.5 0 124 240 51 89 WP_253737137.1 cytochrome P450 [Halohasta salina] diamond 117 45.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halohasta Halohasta salina
27293173 27293173 PRJNA1156092_P_NODE_20443_length_260_cov_1.647059_g20313_i0 PRJNA1156092 20443 260 1.647059 4.2823534 archaeon 1906665 Archaea Archaea 143 3.3599999999999998e-40   NR RYG64625.1 1906665 g20313 i0 81.4 0.992307692307692 86 16 99.2 0 260 3 152 237 RYG64625.1 MAG: 50S ribosomal protein L3, partial [archaeon] diamond 258 143 1 Archaea               archaeon
27672321 27672321 PRJNA1156092_P_NODE_22104_length_251_cov_0.865169_g21974_i0 PRJNA1156092 22104 251 0.865169 2.17157419 archaeon 1906665 Archaea Archaea 70.1 8.35e-12   NR MCQ2818097.1 1906665 g21974 i0 36 1.19521912350598 100 43 98 2 2 247 96 192 MCQ2818097.1 TCR domain-containing protein [archaeon] diamond 300 70.1 1 Archaea               archaeon
27704075 27704075 PRJNA1156092_P_NODE_29504_length_244_cov_0.900585_g29374_i0 PRJNA1156092 29504 244 0.900585 2.1974274 archaeon 1906665 Archaea Archaea 89.4 1.5e-18   NR MDP2435113.1 1906665 g29374 i0 47.6 1.97950819672131 82 41 98.4 1 240 1 540 621 MDP2435113.1 hypothetical protein [archaeon] diamond 483 89.4 1 Archaea               archaeon
27861468 27861468 PRJNA1156092_P_NODE_26105_length_247_cov_0.885057_g25975_i0 PRJNA1156092 26105 247 0.885057 2.18609079 archaeon 1906665 Archaea Archaea 62 2.11e-9   NR RYH21457.1 1906665 g25975 i0 41 0.740890688259109 61 35 74.1 1 183 1 58 117 RYH21457.1 MAG: PaaI family thioesterase [archaeon] diamond 183 62 1 Archaea               archaeon
29850882 29850882 PRJNA1156092_P_NODE_23971_length_249_cov_0.875000_g23841_i0 PRJNA1156092 23971 249 0.875 2.17875 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 43.1 0.0259   NR MAG25949.1 2026773 g23841 i0 34.2 0.91566265060241 76 48 89.2 1 28 249 100 175 MAG25949.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 228 43.1 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
30166538 30166538 PRJNA1156092_P_NODE_25032_length_248_cov_0.880000_g24902_i0 PRJNA1156092 25032 248 0.88 2.1824 Candidatus Anstonellales archaeon 3058027 Archaea Archaea 56.6 4.91e-7   NR MEM4366749.1 3058027 g24902 i0 35.8 0.810483870967742 67 40 79.8 2 26 223 189 253 MEM4366749.1 hypothetical protein [Candidatus Anstonellales archaeon] diamond 201 56.6 1 Archaea   Nanobdellati Candidatus Micrarchaeota Candidatus Micrarchaeia Candidatus Anstonellales     Candidatus Anstonellales archaeon
30767020 30767020 PRJNA1156092_P_NODE_22294_length_251_cov_0.865169_g22164_i0 PRJNA1156092 22294 251 0.865169 2.17157419 Candidatus Methanoperedens sp. 2032688 Archaea Archaea 92 7.360000000000001e-21   NR HWR98909.1 2032688 g22164 i0 59.7 0.860557768924303 72 29 86.1 0 3 218 141 212 HWR98909.1 deoxynucleoside kinase [Candidatus Methanoperedens sp.] diamond 216 92 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Candidatus Methanoperedentaceae Candidatus Methanoperedens Candidatus Methanoperedens sp.
31841761 31841761 PRJNA1156092_P_NODE_25917_length_247_cov_0.885057_g25787_i0 PRJNA1156092 25917 247 0.885057 2.18609079 Candidatus Woesearchaeota archaeon 2026803 Archaea Archaea 80.9 1.54e-15   NR MBI2664459.1 2026803 g25787 i0 55.6 0.983805668016194 81 36 98.4 0 1 243 6864 6944 MBI2664459.1 VCBS repeat-containing protein [Candidatus Woesearchaeota archaeon] diamond 243 80.9 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon
32253573 32253573 PRJNA1156092_P_NODE_25658_length_248_cov_0.880000_g25528_i0 PRJNA1156092 25658 248 0.88 2.1824 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 108 4.87e-26   NR RLI35948.1 2026714 g25528 i0 58.2 0.955645161290323 79 33 95.6 0 248 12 305 383 RLI35948.1 MAG: hypothetical protein DRO66_06560 [Candidatus Bathyarchaeota archaeon] diamond 237 108 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
32840743 32840743 PRJNA1156092_P_NODE_25680_length_248_cov_0.880000_g25550_i0 PRJNA1156092 25680 248 0.88 2.1824 Archaea 2157 Archaea Archaea 108 8.910000000000001e-27   NR MBS3094758.1 2026773 g25550 i0 59.8 2.9758064516129 82 33 99.2 0 2 247 48 129 MBS3094758.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 738 109 0.990825688073395 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;