RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1156092" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 2 ✖

bioproject 1

  • PRJNA1156092 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26660124 26660124 PRJNA1156092_P_NODE_31001_length_242_cov_0.911243_g30871_i0 PRJNA1156092 31001 242 0.911243 2.20520806 Nitrosopumilus sp. 2024843 Archaea Archaea 151 1.4e-45   NR MDH3617759.1 2024843 g30871 i0 95 0.991735537190083 80 4 99.2 0 2 241 11 90 MDH3617759.1 hypothetical protein [Nitrosopumilus sp.] diamond 240 151 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
32253573 32253573 PRJNA1156092_P_NODE_25658_length_248_cov_0.880000_g25528_i0 PRJNA1156092 25658 248 0.88 2.1824 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 108 4.87e-26   NR RLI35948.1 2026714 g25528 i0 58.2 0.955645161290323 79 33 95.6 0 248 12 305 383 RLI35948.1 MAG: hypothetical protein DRO66_06560 [Candidatus Bathyarchaeota archaeon] diamond 237 108 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;