RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1151638" and tax_phylum = "Mycoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1151638 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29282227 29282227 PRJNA1151638_P_NODE_909_length_465_cov_1.647959_g842_i0 PRJNA1151638 909 465 1.647959 7.66300935 Acholeplasmatales bacterium 2053494 Bacteria Bacteria 101 1.07e-21   NR MBS1476640.1 2053494 g842 i0 44.7 2.38064516129032 123 65 78.1 3 368 6 1 122 MBS1476640.1 DNA topoisomerase IV subunit A [Acholeplasmatales bacterium] diamond 1107 101 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales     Acholeplasmatales bacterium
31070896 31070896 PRJNA1151638_P_NODE_7035_length_231_cov_2.962025_g6968_i0 PRJNA1151638 7035 231 2.962025 6.84227775 Bacillati 1783272 Bacteria Bacteria 93.2 5.49e-20   NR HHX78468.1 1898209 g6968 i0 58.3 31.025974025974 72 30 93.5 0 218 3 334 405 HHX78468.1 DNA polymerase III subunit alpha [Acholeplasmataceae bacterium] diamond 7167 94 0.991489361702128 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales Acholeplasmataceae   Acholeplasmataceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;