RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA1151638" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1151638 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13790297 13790297 PRJNA1151638_P_NODE_5211_length_250_cov_0.881356_g5144_i0 PRJNA1151638 5211 250 0.881356 2.20339 Chloroflexia bacterium 2448782 Bacteria Bacteria 186 4.799999999999998e-53   NR MFN8516997.1 2448782 g5144 i0 96.3 0.984 82 3 98.4 0 3 248 309 390 MFN8516997.1 1,4-alpha-glucan branching protein GlgB [Chloroflexia bacterium] diamond 246 186 1 Bacteria   Bacillati Chloroflexota Chloroflexia       Chloroflexia bacterium
27545849 27545849 PRJNA1151638_P_NODE_3104_length_290_cov_3.096774_g3037_i0 PRJNA1151638 3104 290 3.096774 8.9806446 Anaerolineaceae bacterium 2024896 Bacteria Bacteria 72 3.16e-12   NR MFA7407698.1 2024896 g3037 i0 42.1 0.982758620689655 95 51 98.3 2 290 6 99 189 MFA7407698.1 MoxR family ATPase [Anaerolineaceae bacterium] diamond 285 72 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium
28998590 28998590 PRJNA1151638_P_NODE_5468_length_249_cov_0.886364_g5401_i0 PRJNA1151638 5468 249 0.886364 2.20704636 Anaerolineae bacterium 2052143 Bacteria Bacteria 40.4 0.0427   NR MCZ7546588.1 2052143 g5401 i0 43.6 0.469879518072289 39 20 47 1 242 126 35 71 MCZ7546588.1 hypothetical protein [Anaerolineae bacterium] diamond 117 40.4 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
31956144 31956144 PRJNA1151638_P_NODE_4557_length_256_cov_1.622951_g4490_i0 PRJNA1151638 4557 256 1.622951 4.15475456 Bacteria 2 Bacteria Bacteria 70.1 1.01e-11   NR MCQ3952227.1 2026724 g4490 i0 44.2 4.62890625 77 39 85.5 1 227 9 629 705 MCQ3952227.1 hypothetical protein [Chloroflexota bacterium] diamond 1185 70.1 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;