RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA1150539" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1150539 · 6 ✖

analysis 1

  • diamond · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9229799 9229799 PRJNA1150539_S_NODE_92428_length_251_cov_0.865169_g91832_i0 PRJNA1150539 92428 251 0.865169 2.17157419 Pseudoloma neurophilia 146866 Fungi Fungi 166 5.63e-48   NR KRH92970.1 146866 g91832 i0 100 0.99203187250996006 83 0 99.2 0 251 3 259 341 KRH92970.1 Ribonucleotide reductase, beta subunit [Pseudoloma neurophilia] diamond 249 166 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
29250651 29250651 PRJNA1150539_S_NODE_78749_length_267_cov_4.113402_g78153_i0 PRJNA1150539 78749 267 4.113402 10.98278334 Pseudoloma neurophilia 146866 Fungi Fungi 164 1.55e-49   NR KRH94365.1 146866 g78153 i0 98.7 0.876404494382023 78 1 87.6 0 267 34 92 169 KRH94365.1 hypothetical protein M153_2810003241 [Pseudoloma neurophilia] diamond 234 164 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
29471529 29471529 PRJNA1150539_S_NODE_66890_length_284_cov_1.824645_g66294_i0 PRJNA1150539 66890 284 1.824645 5.1819918 Pseudoloma neurophilia 146866 Fungi Fungi 214 3.8e-69   NR KRH93927.1 146866 g66294 i0 100 0.992957746478873 94 0 99.3 0 2 283 88 181 KRH93927.1 hypothetical protein M153_485000642 [Pseudoloma neurophilia] diamond 282 214 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
30925184 30925184 PRJNA1150539_S_NODE_109634_length_226_cov_2.549020_g109038_i0 PRJNA1150539 109634 226 2.54902 5.7607852 Pseudoloma neurophilia 146866 Fungi Fungi 119 6.27e-30   NR KRH93795.1 146866 g109038 i0 98.6 0.969026548672566 73 1 96.9 0 224 6 150 222 KRH93795.1 hypothetical protein M153_5670001766 [Pseudoloma neurophilia] diamond 219 119 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
30925186 30925186 PRJNA1150539_S_NODE_27594_length_359_cov_1.346154_g26998_i0 PRJNA1150539 27594 359 1.346154 4.83269286 Pseudoloma neurophilia 146866 Fungi Fungi 248 2.86e-78   NR KRH93612.1 146866 g26998 i0 100 0.994428969359331 119 0 99.4 0 3 359 245 363 KRH93612.1 peptide elongation factor 1 alpha [Pseudoloma neurophilia] diamond 357 248 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
32506566 32506566 PRJNA1150539_S_NODE_76839_length_270_cov_1.954315_g76243_i0 PRJNA1150539 76839 270 1.954315 5.2766505 Pseudoloma neurophilia 146866 Fungi Fungi 175 3.82e-52   NR KRH95193.1 146866 g76243 i0 100 1 90 0 100 0 270 1 89 178 KRH95193.1 60S ribosomal protein L4 [Pseudoloma neurophilia] diamond 270 175 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;