RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

34 rows where analysis = "diamond", bioproject = "PRJNA1150539" and tax_clade = "Embryophyta"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Embryophyta · 34 ✖

bioproject 1

  • PRJNA1150539 · 34 ✖

analysis 1

  • diamond · 34 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14330236 14330236 PRJNA1150539_S_NODE_36692_length_337_cov_1.416667_g36096_i0 PRJNA1150539 36692 337 1.416667 4.77416779 Buddleja alternifolia 168488 Plants Plants 95.5 4.5e-23   NR KAG8389312.1 168488 g36096 i0 62.7 0.596439169139466 67 20 55.2 1 221 36 27 93 KAG8389312.1 hypothetical protein BUALT_Bualt02G0216300 [Buddleja alternifolia] diamond 201 95.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Scrophulariaceae Buddleja Buddleja alternifolia
26882217 26882217 PRJNA1150539_S_NODE_64581_length_287_cov_3.528037_g63985_i0 PRJNA1150539 64581 287 3.528037 10.12546619 Fraxinus pennsylvanica 56036 Plants Plants 77.4 2.16e-15   NR CAI9779362.1 56036 g63985 i0 92.3 0.407665505226481 39 3 40.8 0 2 118 130 168 CAI9779362.1 unnamed protein product [Fraxinus pennsylvanica] diamond 117 77.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Oleaceae Fraxinus Fraxinus pennsylvanica
26913607 26913607 PRJNA1150539_S_NODE_56362_length_300_cov_2.713656_g55766_i0 PRJNA1150539 56362 300 2.713656 8.140968 Olea europaea subsp. europaea 158383 Plants Plants 85.1 2.93e-19   NR CAA3021318.1 158383 g55766 i0 89.6 0.48 48 5 48 0 299 156 38 85 CAA3021318.1 Hypothetical predicted protein [Olea europaea subsp. europaea] diamond 144 85.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Oleaceae Olea Olea europaea
27324817 27324817 PRJNA1150539_S_NODE_71483_length_277_cov_3.813725_g70887_i0 PRJNA1150539 71483 277 3.813725 10.56401825 Carnegiea gigantea 171969 Plants Plants 43.5 0.0276   NR KAJ8431470.1 171969 g70887 i0 41.5 0.574007220216607 53 24 54.2 2 127 276 162 210 KAJ8431470.1 hypothetical protein Cgig2_033984 [Carnegiea gigantea] diamond 159 43.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Cactaceae Carnegiea Carnegiea gigantea
27451340 27451340 PRJNA1150539_S_NODE_105863_length_234_cov_5.913043_g105267_i0 PRJNA1150539 105863 234 5.913043 13.83652062 Calluna vulgaris 13385 Plants Plants 41.6 0.0312   NR CAM5849310.1 13385 g105267 i0 54.8 0.538461538461538 42 14 50 2 68 184 53 92 CAM5849310.1 unnamed protein product [Calluna vulgaris] diamond 126 41.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ericales Ericaceae Calluna Calluna vulgaris
27577394 27577394 PRJNA1150539_S_NODE_109964_length_225_cov_4.157895_g109368_i0 PRJNA1150539 109964 225 4.157895 9.35526375 Fraxinus pennsylvanica 56036 Plants Plants 94.4 7.059999999999999e-23   NR CAI9772053.1 56036 g109368 i0 90.5 0.84 63 5 84 1 224 36 21 82 CAI9772053.1 unnamed protein product [Fraxinus pennsylvanica] diamond 189 94.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Oleaceae Fraxinus Fraxinus pennsylvanica
27577416 27577416 PRJNA1150539_S_NODE_98224_length_245_cov_1.761628_g97628_i0 PRJNA1150539 98224 245 1.761628 4.3159886 Arabidopsis suecica 45249 Plants Plants 48.1 4.9e-4   NR KAG7563755.1 45249 g97628 i0 27.3 0.942857142857143 77 55 94.3 1 5 235 1263 1338 KAG7563755.1 Endonuclease/exonuclease/phosphatase superfamily [Arabidopsis suecica] diamond 231 48.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Arabidopsis Arabidopsis suecica
27829963 27829963 PRJNA1150539_S_NODE_22384_length_374_cov_2.897010_g21788_i0 PRJNA1150539 22384 374 2.89701 10.8348174 Fraxinus pennsylvanica 56036 Plants Plants 154 2.73e-44   NR CAI9770908.1 56036 g21788 i0 100 0.56951871657754 71 0 57 0 372 160 164 234 CAI9770908.1 unnamed protein product [Fraxinus pennsylvanica] diamond 213 154 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Oleaceae Fraxinus Fraxinus pennsylvanica
27829973 27829973 PRJNA1150539_S_NODE_6804_length_490_cov_2.364508_g6210_i0 PRJNA1150539 6804 490 2.364508 11.5860892 Olea europaea var. sylvestris 158386 Plants Plants 73.9 1.74e-13   NR XP_022855087.1 158386 g6210 i0 83.7 0.3 49 8 30 0 27 173 1 49 XP_022855087.1 ATP-dependent RNA helicase mak5-like [Olea europaea var. sylvestris] diamond 147 73.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Oleaceae Olea Olea europaea
28335156 28335156 PRJNA1150539_S_NODE_101786_length_242_cov_1.260355_g101190_i0 PRJNA1150539 101786 242 1.260355 3.0500591 Asparagus officinalis 4686 Plants Plants 42.4 0.0306   NR ONK56309.1 4686 g101190 i0 34.5 1.43801652892562 58 31 70.7 2 171 1 113 164 ONK56309.1 uncharacterized protein A4U43_C10F6570 [Asparagus officinalis] diamond 348 42.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asparagales Asparagaceae Asparagus Asparagus officinalis
28808468 28808468 PRJNA1150539_S_NODE_104168_length_238_cov_3.393939_g103572_i0 PRJNA1150539 104168 238 3.393939 8.07757482 Ensete ventricosum 4639 Plants Plants 45.1 0.00297   NR RZR95583.1 4639 g103572 i0 60.5 0.478991596638655 38 14 46.6 1 222 112 27 64 RZR95583.1 hypothetical protein BHM03_00024443 [Ensete ventricosum] diamond 114 45.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Zingiberales Musaceae Ensete Ensete ventricosum
29156336 29156336 PRJNA1150539_S_NODE_45889_length_318_cov_3.881633_g45293_i0 PRJNA1150539 45889 318 3.881633 12.34359294 Lupinus albus 3870 Plants Plants 67 1.44e-11   NR KAF1897960.1 3870 g45293 i0 70.7 1.09433962264151 58 16 54.7 1 174 1 66 122 KAF1897960.1 hypothetical protein Lal_00032722 [Lupinus albus] diamond 348 67 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Lupinus Lupinus albus
29313994 29313994 PRJNA1150539_S_NODE_77689_length_269_cov_1.571429_g77093_i0 PRJNA1150539 77689 269 1.571429 4.22714401 Tanacetum cinerariifolium 118510 Plants Plants 42.4 0.0499   NR GEV03728.1 118510 g77093 i0 51.4 0.390334572490706 35 17 39 0 152 256 48 82 GEV03728.1 hypothetical protein [Tanacetum cinerariifolium] diamond 105 42.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Tanacetum Tanacetum cinerariifolium
29503291 29503291 PRJNA1150539_S_NODE_58910_length_296_cov_2.152466_g58314_i0 PRJNA1150539 58910 296 2.152466 6.37129936 Quercus rubra 3512 Plants Plants 100 1.14e-25   NR KAK4589130.1 3512 g58314 i0 92.6 0.547297297297297 54 3 54.7 1 2 163 20 72 KAK4589130.1 hypothetical protein RGQ29_019925 [Quercus rubra] diamond 162 100 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Fagaceae Quercus Quercus rubra
29755841 29755841 PRJNA1150539_S_NODE_32411_length_346_cov_8.278388_g31815_i0 PRJNA1150539 32411 346 8.278388 28.64322248 Forsythia ovata 205694 Plants Plants 45.4 0.00609   NR KAL2548042.1 205694 g31815 i0 50 0.416184971098266 48 15 39.9 2 345 208 26 66 KAL2548042.1 Rapid ALkalinization Factor [Forsythia ovata] diamond 144 45.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Oleaceae Forsythia Forsythia ovata
29755852 29755852 PRJNA1150539_S_NODE_89691_length_254_cov_1.276243_g89095_i0 PRJNA1150539 89691 254 1.276243 3.24165722 Cryptomeria japonica 3369 Plants Plants 45.8 0.00298   NR XP_059065404.1 3369 g89095 i0 36.5 2.23228346456693 63 37 70.9 1 230 51 186 248 XP_059065404.1 protein neprosin-like [Cryptomeria japonica] diamond 567 45.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Cupressales Cupressaceae Cryptomeria Cryptomeria japonica
29977065 29977065 PRJNA1150539_S_NODE_91771_length_251_cov_2.713483_g91175_i0 PRJNA1150539 91771 251 2.713483 6.81084233 Artemisia annua 35608 Plants Plants 43.1 0.0248   NR PWA48977.1 35608 g91175 i0 37.2 0.51394422310757 43 23 46.6 1 169 53 151 193 PWA48977.1 hypothetical protein CTI12_AA486280 [Artemisia annua] diamond 129 43.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Artemisia Artemisia annua
30071758 30071758 PRJNA1150539_S_NODE_35172_length_340_cov_3.131086_g34576_i0 PRJNA1150539 35172 340 3.131086 10.6456924 Fraxinus pennsylvanica 56036 Plants Plants 44.3 0.031   NR CAI9756695.1 56036 g34576 i0 34.4 0.538235294117647 61 36 53.8 1 241 59 22 78 CAI9756695.1 unnamed protein product [Fraxinus pennsylvanica] diamond 183 44.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Oleaceae Fraxinus Fraxinus pennsylvanica
30356765 30356765 PRJNA1150539_S_NODE_45972_length_318_cov_3.048980_g45376_i0 PRJNA1150539 45972 318 3.04898 9.6957564 Brassica cretica 69181 Plants Plants 43.1 0.0342   NR KAF3509111.1 69181 g45376 i0 42.4 0.556603773584906 59 31 52.8 3 53 220 73 131 KAF3509111.1 hypothetical protein F2Q69_00007225 [Brassica cretica] diamond 177 43.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Brassica Brassica cretica
30388280 30388280 PRJNA1150539_S_NODE_85633_length_259_cov_1.241935_g85037_i0 PRJNA1150539 85633 259 1.241935 3.21661165 Olea europaea subsp. europaea 158383 Plants Plants 87 1.09e-17   NR CAA2996546.1 158383 g85037 i0 92.7 0.474903474903475 41 3 47.5 0 257 135 483 523 CAA2996546.1 GDSL esterase lipase At3g48460-like [Olea europaea subsp. europaea] diamond 123 87 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Oleaceae Olea Olea europaea
30451265 30451265 PRJNA1150539_S_NODE_106033_length_234_cov_3.093168_g105437_i0 PRJNA1150539 106033 234 3.093168 7.23801312 Fraxinus pennsylvanica 56036 Plants Plants 77 1.97e-15   NR CAI9785818.1 56036 g105437 i0 72.9 0.615384615384615 48 5 51.3 1 1 120 130 177 CAI9785818.1 unnamed protein product [Fraxinus pennsylvanica] diamond 144 77 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Oleaceae Fraxinus Fraxinus pennsylvanica
30672093 30672093 PRJNA1150539_S_NODE_82073_length_263_cov_2.421053_g81477_i0 PRJNA1150539 82073 263 2.421053 6.36736939 Sesamum indicum 4182 Plants Plants 42.7 0.0497   NR XP_020548375.1 4182 g81477 i0 36.1 0.695817490494297 61 37 68.4 2 15 194 12 71 XP_020548375.1 BEACH domain-containing protein B [Sesamum indicum] diamond 183 42.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Pedaliaceae Sesamum Sesamum indicum
30703715 30703715 PRJNA1150539_S_NODE_44774_length_320_cov_4.421053_g44178_i0 PRJNA1150539 44774 320 4.421053 14.1473696 Senna tora 362788 Plants Plants 43.1 0.0187   NR KAF7820838.1 362788 g44178 i0 38.2 0.6375 68 37 60.9 3 306 112 36 101 KAF7820838.1 uncharacterized protein G2W53_026293 [Senna tora] diamond 204 43.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Senna Senna tora
30925194 30925194 PRJNA1150539_S_NODE_65574_length_286_cov_1.666667_g64978_i0 PRJNA1150539 65574 286 1.666667 4.76666762 Olea europaea var. sylvestris 158386 Plants Plants 46.2 0.00363   NR XP_022841829.1 158386 g64978 i0 32 0.786713286713287 75 47 77.6 2 41 262 160 231 XP_022841829.1 uncharacterized protein LOC111365505 [Olea europaea var. sylvestris] diamond 225 46.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Oleaceae Olea Olea europaea
30988272 30988272 PRJNA1150539_S_NODE_46514_length_317_cov_2.614754_g45918_i0 PRJNA1150539 46514 317 2.614754 8.28877018 Vigna unguiculata 3917 Plants Plants 43.5 0.0226   NR QCD80736.1 3917 g45918 i0 49 0.482649842271293 51 24 46.4 2 317 171 67 117 QCD80736.1 hypothetical protein DEO72_LG2g1058 [Vigna unguiculata] diamond 153 43.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Vigna Vigna unguiculata
31019814 31019814 PRJNA1150539_S_NODE_25055_length_366_cov_3.416382_g24459_i0 PRJNA1150539 25055 366 3.416382 12.50395812 Artemisia annua 35608 Plants Plants 140 7.62e-39   NR PWA76771.1 35608 g24459 i0 82.9 0.622950819672131 76 13 62.3 0 345 118 149 224 PWA76771.1 zinc finger, RING/FYVE/PHD-type [Artemisia annua] diamond 228 140 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Artemisia Artemisia annua
31082943 31082943 PRJNA1150539_S_NODE_109675_length_226_cov_2.457516_g109079_i0 PRJNA1150539 109675 226 2.457516 5.55398616 Macadamia integrifolia 60698 Plants Plants 42.4 0.039   NR XP_042497682.1 60698 g109079 i0 40.5 0.557522123893805 42 16 43.8 2 92 190 233 274 XP_042497682.1 LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 [Macadamia integrifolia] diamond 126 42.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Proteales Proteaceae Macadamia Macadamia integrifolia
31145665 31145665 PRJNA1150539_S_NODE_30615_length_351_cov_3.046763_g30019_i0 PRJNA1150539 30615 351 3.046763 10.69413813 Pistacia atlantica 434234 Plants Plants 135 7.29e-39   NR KAJ0080705.1 434234 g30019 i0 98.5 0.564102564102564 66 1 56.4 0 347 150 24 89 KAJ0080705.1 hypothetical protein Patl1_10681 [Pistacia atlantica] diamond 198 135 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Anacardiaceae Pistacia Pistacia atlantica
31240831 31240831 PRJNA1150539_S_NODE_89295_length_254_cov_2.552486_g88699_i0 PRJNA1150539 89295 254 2.552486 6.48331444 Nicotiana attenuata 49451 Plants Plants 43.9 0.0156   NR OIT36970.1 49451 g88699 i0 32.8 0.755905511811024 64 25 75.6 2 36 227 225 270 OIT36970.1 hypothetical protein A4A49_26595 [Nicotiana attenuata] diamond 192 43.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Nicotiana Nicotiana attenuata
31335725 31335725 PRJNA1150539_S_NODE_81796_length_263_cov_5.810526_g81200_i0 PRJNA1150539 81796 263 5.810526 15.28168338 Salvia splendens 180675 Plants Plants 43.5 0.0236   NR KAG6426300.1 180675 g81200 i0 44.7 0.536121673003802 47 22 50.2 2 98 229 134 179 KAG6426300.1 hypothetical protein SASPL_110522 [Salvia splendens] diamond 141 43.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Lamiaceae Salvia Salvia splendens
31683571 31683571 PRJNA1150539_S_NODE_100137_length_243_cov_2.582353_g99541_i0 PRJNA1150539 100137 243 2.582353 6.27511779 Protea cynaroides 273540 Plants Plants 43.1 0.0289   NR KAJ4977034.1 273540 g99541 i0 40 0.740740740740741 60 35 72.8 1 237 61 1490 1549 KAJ4977034.1 hypothetical protein NE237_002140 [Protea cynaroides] diamond 180 43.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Proteales Proteaceae Protea Protea cynaroides
31861201 31861201 PRJNA1150539_S_NODE_71497_length_277_cov_3.666667_g70901_i0 PRJNA1150539 71497 277 3.666667 10.15666759 Streptophyta 35493 Plants Plants 45.1 0.00827   NR XP_024397240.1 3218 g70901 i0 39.3 1.22382671480144 56 30 60.6 1 75 242 474 525 XP_024397240.1 uncharacterized protein LOC112292712 isoform X2 [Physcomitrium patens] diamond 339 45.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Bryopsida Funariales Funariaceae Physcomitrium Physcomitrium patens
32399351 32399351 PRJNA1150539_S_NODE_72279_length_276_cov_2.881773_g71683_i0 PRJNA1150539 72279 276 2.881773 7.95369348 Prunus 3754 Plants Plants 43.9 0.0205   NR XP_034226084.1 3755 g71683 i0 29.7 5.48913043478261 101 49 97.8 4 1 270 175 264 XP_034226084.1 uncharacterized protein LOC117635824 isoform X2 [Prunus dulcis] diamond 1515 43.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Rosaceae Prunus Prunus dulcis
32727122 32727122 PRJNA1150539_S_NODE_30260_length_352_cov_2.759857_g29664_i0 PRJNA1150539 30260 352 2.759857 9.71469664 Quercus rubra 3512 Plants Plants 145 4.959999999999998e-42   NR KAK4594628.1 3512 g29664 i0 72.2 0.826704545454545 97 27 82.7 0 352 62 63 159 KAK4594628.1 hypothetical protein RGQ29_018349 [Quercus rubra] diamond 291 145 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Fagaceae Quercus Quercus rubra

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;