RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA1148190" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1148190 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27735130 27735130 PRJNA1148190_P_NODE_560324_length_255_cov_1.362637_g549151_i0 PRJNA1148190 560324 255 1.362637 3.47472435 Ripithav virus 3130922 Viruses Viruses 42.7 0.0424   NR WZH60556.1 3130922 g549151 i0 29.5 0.917647058823529 78 53 91.8 1 249 16 269 344 WZH60556.1 MAG: putative capsid protein [Ripithav virus] diamond 234 42.7 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Picobirnaviridae   Ripithav virus
30324391 30324391 PRJNA1148190_P_NODE_36032_length_1107_cov_2.066731_g25876_i0 PRJNA1148190 36032 1107 2.066731 22.87871217 Ips partiti-like virus 1 3077388 Viruses Viruses 236 2.72e-70   NR WPV71143.1 3077388 g25876 i0 39.4 0.818428184281843 302 175 81.3 4 1059 160 63 358 WPV71143.1 MAG: hypothetical protein [Ips partiti-like virus 1] diamond 906 236 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Ips partiti-like virus 1
30513844 30513844 PRJNA1148190_P_NODE_632873_length_249_cov_0.875000_g621700_i0 PRJNA1148190 632873 249 0.875 2.17875 Ripikrak virus 3130541 Viruses Viruses 43.5 0.022   NR WZH59832.1 3130541 g621700 i0 35.6 1.04819277108434 87 51 98.8 3 3 248 2614 2700 WZH59832.1 MAG: RNA-dependent RNA polymerase [Ripikrak virus] diamond 261 43.5 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Ripikrak virus
32411438 32411438 PRJNA1148190_P_NODE_75919_length_632_cov_2.506261_g25876_i1 PRJNA1148190 75919 632 2.506261 15.83956952 Ips partiti-like virus 1 3077388 Viruses Viruses 126 2.28e-30   NR WPV71143.1 3077388 g25876 i1 36.9 1.7753164556962 187 112 87.8 3 584 30 63 245 WPV71143.1 MAG: hypothetical protein [Ips partiti-like virus 1] diamond 1122 126 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Ips partiti-like virus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;