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contig_metadata

30 rows where analysis = "diamond", bioproject = "PRJNA1148190" and tax_phylum = "Parabasalia"

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tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 30 ✖

tax_clade 1

bioproject 1

  • PRJNA1148190 · 30 ✖

analysis 1

  • diamond · 30 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13788079 13788079 PRJNA1148190_P_NODE_310351_length_315_cov_2.053719_g299178_i0 PRJNA1148190 310351 315 2.053719 6.46921485 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 125 3.1699999999999996e-32   NR XP_068352594.1 1144522 g299178 i0 55.4 2.79047619047619 101 45 96.2 0 13 315 37 137 XP_068352594.1 Serine/threonine-protein phosphatase PP1 [Tritrichomonas foetus] diamond 879 125 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
23987936 23987936 PRJNA1148190_P_NODE_557419_length_255_cov_2.241758_g546246_i0 PRJNA1148190 557419 255 2.241758 5.7164829 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 102 1.99e-23   NR XP_068360235.1 1144522 g546246 i0 72.7 5.41176470588235 66 18 77.6 0 255 58 355 420 XP_068360235.1 ATP-dependent RNA helicase SUB2 [Tritrichomonas foetus] diamond 1380 102 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
26647911 26647911 PRJNA1148190_P_NODE_63941_length_709_cov_2.094340_g52907_i0 PRJNA1148190 63941 709 2.09434 14.8488706 root 1 Root_unresolved Root_unresolved 152 1.12e-42   NR XP_001308190.1 412133 g52907 i0 50.7 1.20592383638928 144 66 60.1 2 118 543 1 141 XP_001308190.1 Macro Poa1p-like domain-containing protein [Trichomonas vaginalis G3] diamond 855 153 0.993464052287582 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
27040109 27040109 PRJNA1148190_P_NODE_711342_length_245_cov_0.895349_g700169_i0 PRJNA1148190 711342 245 0.895349 2.19360505 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 59.3 4.46e-8   NR XP_068348599.1 1144522 g700169 i0 53.1 0.6 49 23 60 0 3 149 233 281 XP_068348599.1 Syntaxin-1A [Tritrichomonas foetus] diamond 147 59.3 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
27228672 27228672 PRJNA1148190_P_NODE_167363_length_407_cov_1.922156_g156194_i0 PRJNA1148190 167363 407 1.922156 7.82317492 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 75.5 7.93e-13   NR XP_001583409.1 412133 g156194 i0 37.5 1.24570024570025 88 55 64.9 0 384 121 85 172 XP_001583409.1 STKc CK1 domain-containing protein [Trichomonas vaginalis G3] diamond 507 75.5 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
27229542 27229542 PRJNA1148190_P_NODE_636963_length_248_cov_1.640000_g625790_i0 PRJNA1148190 636963 248 1.64 4.0672 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 45.8 0.00314   NR XP_067779316.1 135588 g625790 i0 34.1 0.991935483870968 82 47 99.2 2 3 248 194 268 XP_067779316.1 cask-interacting protein (caskin) [Histomonas meleagridis] diamond 246 45.8 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
27450004 27450004 PRJNA1148190_P_NODE_100083_length_534_cov_2.366594_g88927_i0 PRJNA1148190 100083 534 2.366594 12.63761196 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 65.9 5.89e-9   NR XP_001318707.1 412133 g88927 i0 37.2 0.438202247191011 78 49 43.8 0 318 85 310 387 XP_001318707.1 protein kinase C protein [Trichomonas vaginalis G3] diamond 234 65.9 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
27545403 27545403 PRJNA1148190_P_NODE_563884_length_254_cov_1.690608_g552711_i0 PRJNA1148190 563884 254 1.6906080000000001 4.29414432 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 55.8 1.04e-6   NR XP_001313744.1 412133 g552711 i0 44.4 0.637795275590551 54 30 63.8 0 50 211 124 177 XP_001313744.1 autophagy of peroxisome [Trichomonas vaginalis G3] diamond 162 55.8 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
27986955 27986955 PRJNA1148190_P_NODE_299945_length_320_cov_1.072874_g288772_i0 PRJNA1148190 299945 320 1.072874 3.4331968 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 44.3 0.0272   NR XP_001325236.1 412133 g288772 i0 29.7 0.853125 91 62 83.4 1 290 24 514 604 XP_001325236.1 uncharacterized protein TVAGG3_0896380 [Trichomonas vaginalis G3] diamond 273 44.3 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
28019123 28019123 PRJNA1148190_P_NODE_568065_length_253_cov_2.138889_g556892_i0 PRJNA1148190 568065 253 2.138889 5.41138917 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 53.1 4.75e-6   NR XP_001328863.1 412133 g556892 i0 45.9 1.44664031620553 61 30 70 2 181 5 16 75 XP_001328863.1 retrograde vesicle-mediated transport, Golgi to ER [Trichomonas vaginalis G3] diamond 366 53.1 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
28544193 28544193 PRJNA1148190_P_NODE_62467_length_721_cov_1.458333_g51450_i0 PRJNA1148190 62467 721 1.458333 10.51458093 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 52 8.78e-4   NR XP_001328087.1 412133 g51450 i0 54.5 0.599167822468793 44 20 18.3 0 217 348 222 265 XP_001328087.1 protein tyrosine/serine/threonine phosphatase protein [Trichomonas vaginalis G3] diamond 432 52 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
28682405 28682405 PRJNA1148190_P_NODE_654167_length_247_cov_2.419540_g642994_i0 PRJNA1148190 654167 247 2.41954 5.9762638 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 52.8 1.07e-5   NR XP_067770480.1 135588 g642994 i0 44.6 0.898785425101215 74 30 87.4 4 228 13 50 114 XP_067770480.1 Clan SC, family S9, unassigned serine peptidase [Histomonas meleagridis] diamond 222 52.8 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
29218229 29218229 PRJNA1148190_P_NODE_138549_length_447_cov_1.235294_g127384_i0 PRJNA1148190 138549 447 1.235294 5.52176418 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 45.4 0.0304   NR XP_068365464.1 1144522 g127384 i0 26.4 0.738255033557047 110 76 70.5 2 317 3 110 219 XP_068365464.1 uncharacterized protein TRFO_17916 [Tritrichomonas foetus] diamond 330 45.4 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
29438944 29438944 PRJNA1148190_P_NODE_276950_length_330_cov_1.217899_g265779_i0 PRJNA1148190 276950 330 1.217899 4.0190667 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 80.5 2.5e-15   NR XP_067776481.1 135588 g265779 i0 41.3 0.727272727272727 80 47 72.7 0 3 242 213 292 XP_067776481.1 Pkinase-domain-containing protein [Histomonas meleagridis] diamond 240 80.5 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
29534262 29534262 PRJNA1148190_P_NODE_404190_length_285_cov_2.084906_g393017_i0 PRJNA1148190 404190 285 2.084906 5.9419821 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 45.8 0.00381   NR XP_001582890.1 412133 g393017 i0 50 0.884210526315789 42 19 44.2 1 275 150 170 209 XP_001582890.1 protein serine/threonine kinase protein [Trichomonas vaginalis G3] diamond 252 45.8 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
29755080 29755080 PRJNA1148190_P_NODE_386411_length_289_cov_1.254630_g375238_i0 PRJNA1148190 386411 289 1.25463 3.6258807 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 49.7 2.34e-4   NR XP_068368443.1 1144522 g375238 i0 66.7 0.342560553633218 33 11 34.3 0 104 6 16 48 XP_068368443.1 putative phospholipid-transporting ATPase 4 [Tritrichomonas foetus] diamond 99 49.7 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
29882141 29882141 PRJNA1148190_P_NODE_589431_length_251_cov_0.865169_g578258_i0 PRJNA1148190 589431 251 0.865169 2.17157419 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 45.8 0.00343   NR XP_068357091.1 1144522 g578258 i0 45.9 0.442231075697211 37 20 44.2 0 63 173 657 693 XP_068357091.1 uncharacterized protein TRFO_28680 [Tritrichomonas foetus] diamond 111 45.8 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
29976862 29976862 PRJNA1148190_P_NODE_704691_length_245_cov_0.895349_g693518_i0 PRJNA1148190 704691 245 0.895349 2.19360505 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 43.5 0.0206   NR XP_001306845.1 412133 g693518 i0 36.4 0.673469387755102 55 33 67.3 1 245 81 426 478 XP_001306845.1 WD repeat-containing protein 3 family [Trichomonas vaginalis G3] diamond 165 43.5 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
30008207 30008207 PRJNA1148190_P_NODE_451271_length_276_cov_1.418719_g440098_i0 PRJNA1148190 451271 276 1.418719 3.91566444 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 57.4 3.75e-7   NR XP_068370099.1 1144522 g440098 i0 33 0.956521739130435 88 58 94.6 1 11 271 35 122 XP_068370099.1 CAMK family protein kinase [Tritrichomonas foetus] diamond 264 57.4 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
30102258 30102258 PRJNA1148190_P_NODE_231232_length_354_cov_1.530249_g220062_i0 PRJNA1148190 231232 354 1.530249 5.41708146 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 62.8 1.08e-8   NR XP_067769474.1 135588 g220062 i0 47.2 0.449152542372881 53 28 44.9 0 302 144 214 266 XP_067769474.1 CMGC/MAPK/ERK7 protein kinase [Histomonas meleagridis] diamond 159 62.8 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
30197084 30197084 PRJNA1148190_P_NODE_252612_length_342_cov_1.178439_g241442_i0 PRJNA1148190 252612 342 1.178439 4.03026138 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 56.6 1.6e-6   NR XP_068357601.1 1144522 g241442 i0 40.7 0.473684210526316 54 32 47.4 0 8 169 104 157 XP_068357601.1 phospholipid-translocating P-type ATPase, flippase family protein [Tritrichomonas foetus] diamond 162 56.6 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
30355994 30355994 PRJNA1148190_P_NODE_399812_length_286_cov_1.605634_g388639_i0 PRJNA1148190 399812 286 1.605634 4.59211324 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 84 1.99e-16   NR XP_067774949.1 135588 g388639 i0 45.5 1.03846153846154 99 44 99.7 2 2 286 371 463 XP_067774949.1 Copine family protein [Histomonas meleagridis] diamond 297 84 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
30830014 30830014 PRJNA1148190_P_NODE_743734_length_243_cov_0.905882_g732561_i0 PRJNA1148190 743734 243 0.905882 2.20129326 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 62.4 4.55e-9   NR XP_001307793.1 412133 g732561 i0 49.1 2.07407407407407 57 28 69.1 1 240 73 51 107 XP_001307793.1 CAMK family protein kinase family [Trichomonas vaginalis G3] diamond 504 62.4 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
31240449 31240449 PRJNA1148190_P_NODE_612255_length_250_cov_0.870056_g601082_i0 PRJNA1148190 612255 250 0.870056 2.17514 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 44.3 0.0115   NR XP_001583255.1 412133 g601082 i0 42.3 0.624 52 20 62.4 1 185 30 357 398 XP_001583255.1 regulation of SNARE complex assembly [Trichomonas vaginalis G3] diamond 156 44.3 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
31482023 31482023 PRJNA1148190_P_NODE_600856_length_250_cov_1.322034_g589683_i0 PRJNA1148190 600856 250 1.322034 3.305085 Cryptophyceae 3027 Parabasalia other_Eukaryota 48.1 4.64e-4   NR XP_001312703.1 412133 g589683 i0 35.2 1.62 71 41 85.2 2 240 28 158 223 XP_001312703.1 protein serine/threonine kinase protein [Trichomonas vaginalis G3] diamond 405 48.1 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
31671414 31671414 PRJNA1148190_P_NODE_534437_length_260_cov_1.294118_g523264_i0 PRJNA1148190 534437 260 1.294118 3.3647068 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 82.4 4.04e-16   NR XP_068360235.1 1144522 g523264 i0 60.9 3.69230769230769 64 25 73.8 0 259 68 352 415 XP_068360235.1 ATP-dependent RNA helicase SUB2 [Tritrichomonas foetus] diamond 960 83.2 0.990384615384615 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
31955971 31955971 PRJNA1148190_P_NODE_284917_length_326_cov_1.683794_g273746_i0 PRJNA1148190 284917 326 1.683794 5.48916844 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 45.1 0.014   NR XP_068370220.1 1144522 g273746 i0 51.4 0.938650306748466 37 18 34 0 265 155 372 408 XP_068370220.1 uncharacterized protein TRFO_41307 [Tritrichomonas foetus] diamond 306 45.1 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
32158245 32158245 PRJNA1148190_P_NODE_69038_length_673_cov_1.283333_g57964_i0 PRJNA1148190 69038 673 1.283333 8.63683109 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 51.6 0.0012   NR XP_001313626.1 412133 g57964 i0 51.1 0.410104011887073 47 23 21 0 409 549 557 603 XP_001313626.1 ubiquitinyl hydrolase protein [Trichomonas vaginalis G3] diamond 276 51.6 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
32316323 32316323 PRJNA1148190_P_NODE_515059_length_264_cov_0.968586_g503886_i0 PRJNA1148190 515059 264 0.968586 2.55706704 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 43.1 0.0377   NR XP_001322346.1 412133 g503886 i0 34.1 1 88 51 95.5 2 264 13 206 290 XP_001322346.1 dynein axonemal heavy chain 7-related family [Trichomonas vaginalis G3] diamond 264 43.1 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
32758528 32758528 PRJNA1148190_P_NODE_96460_length_546_cov_0.923890_g85309_i0 PRJNA1148190 96460 546 0.92389 5.0444394 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 64.3 2.41e-8   NR XP_068357113.1 1144522 g85309 i0 57.6 0.324175824175824 59 25 32.4 0 478 302 369 427 XP_068357113.1 uncharacterized protein TRFO_28638 [Tritrichomonas foetus] diamond 177 64.3 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;