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contig_metadata

10 rows where analysis = "diamond", bioproject = "PRJNA1148190" and tax_phylum = "Candidatus Methanomethylicota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methanomethylicota · 10 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1148190 · 10 ✖

analysis 1

  • diamond · 10 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27166513 27166513 PRJNA1148190_P_NODE_91722_length_562_cov_1.830266_g80581_i0 PRJNA1148190 91722 562 1.830266 10.28609492 Candidatus Methanomethylicaceae archaeon 2282146 Archaea Archaea 55.8 1.69e-5   NR MEM4203151.1 3058293 g80581 i0 37.3 0.400355871886121 75 46 39.5 1 339 560 35 109 MEM4203151.1 hypothetical protein [Candidatus Methanomethylicaceae archaeon] diamond 225 55.8 1 Archaea   Thermoproteati Candidatus Methanomethylicota Candidatus Methanomethylicia Candidatus Methanomethylicales Candidatus Methanomethylicaceae   Candidatus Methanomethylicaceae archaeon
27703223 27703223 PRJNA1148190_P_NODE_37524_length_1068_cov_1.809045_g27279_i0 PRJNA1148190 37524 1068 1.809045 19.3206006 Candidatus Methanomethylicaceae archaeon 2282146 Archaea Archaea 293 1.74e-92   NR MEM4203009.1 3058293 g27279 i0 45.3 0.955056179775281 340 183 94.9 3 53 1066 10 348 MEM4203009.1 replicative DNA helicase [Candidatus Methanomethylicaceae archaeon] diamond 1020 293 1 Archaea   Thermoproteati Candidatus Methanomethylicota Candidatus Methanomethylicia Candidatus Methanomethylicales Candidatus Methanomethylicaceae   Candidatus Methanomethylicaceae archaeon
27987744 27987744 PRJNA1148190_P_NODE_71565_length_657_cov_1.700342_g60473_i0 PRJNA1148190 71565 657 1.700342 11.17124694 Candidatus Methanomethylicaceae archaeon 2282146 Archaea Archaea 114 1.63e-26   NR MEM4203151.1 3058293 g60473 i0 40.9 0.80365296803653 176 95 78.1 4 10 522 158 329 MEM4203151.1 hypothetical protein [Candidatus Methanomethylicaceae archaeon] diamond 528 114 1 Archaea   Thermoproteati Candidatus Methanomethylicota Candidatus Methanomethylicia Candidatus Methanomethylicales Candidatus Methanomethylicaceae   Candidatus Methanomethylicaceae archaeon
27987918 27987918 PRJNA1148190_P_NODE_94165_length_553_cov_2.456250_g83018_i0 PRJNA1148190 94165 553 2.45625 13.5830625 Candidatus Methanomethylicota archaeon 2056631 Archaea Archaea 114 1.37e-27   NR RLE52379.1 2250257 g83018 i0 40.5 0.857142857142857 158 90 84.6 3 523 56 1 156 RLE52379.1 MAG: hypothetical protein DRJ26_04795, partial [Candidatus Methanomethylicota archaeon] diamond 474 114 1 Archaea   Thermoproteati Candidatus Methanomethylicota         Candidatus Methanomethylicota archaeon
28050934 28050934 PRJNA1148190_P_NODE_789745_length_241_cov_0.916667_g778572_i0 PRJNA1148190 789745 241 0.916667 2.20916747 Candidatus Methanomethylicaceae archaeon 2282146 Archaea Archaea 127 5.689999999999998e-32   NR MEM2002945.1 3058293 g778572 i0 76.6 0.95850622406639 77 18 95.9 0 241 11 452 528 MEM2002945.1 hypothetical protein [Candidatus Methanomethylicaceae archaeon] diamond 231 127 1 Archaea   Thermoproteati Candidatus Methanomethylicota Candidatus Methanomethylicia Candidatus Methanomethylicales Candidatus Methanomethylicaceae   Candidatus Methanomethylicaceae archaeon
28397044 28397044 PRJNA1148190_P_NODE_101266_length_531_cov_1.008734_g90110_i0 PRJNA1148190 101266 531 1.008734 5.35637754 Candidatus Methanomethylicota archaeon 2056631 Archaea Archaea 127 6.420000000000001e-33   NR RLE52379.1 2250257 g90110 i0 44.8 0.870056497175141 154 83 87 2 529 68 92 243 RLE52379.1 MAG: hypothetical protein DRJ26_04795, partial [Candidatus Methanomethylicota archaeon] diamond 462 127 1 Archaea   Thermoproteati Candidatus Methanomethylicota         Candidatus Methanomethylicota archaeon
29913083 29913083 PRJNA1148190_P_NODE_243911_length_347_cov_0.978102_g232741_i0 PRJNA1148190 243911 347 0.978102 3.39401394 Candidatus Methanomethylicota archaeon 2056631 Archaea Archaea 78.2 9.76e-15   NR RLE52379.1 2250257 g232741 i0 43 0.743515850144092 86 47 74.4 2 299 42 73 156 RLE52379.1 MAG: hypothetical protein DRJ26_04795, partial [Candidatus Methanomethylicota archaeon] diamond 258 78.2 1 Archaea   Thermoproteati Candidatus Methanomethylicota         Candidatus Methanomethylicota archaeon
29976233 29976233 PRJNA1148190_P_NODE_339691_length_304_cov_1.549784_g328518_i0 PRJNA1148190 339691 304 1.549784 4.71134336 Candidatus Methanomethylicota archaeon 2056631 Archaea Archaea 74.7 1.17e-13   NR RLE52379.1 2250257 g328518 i0 55.6 1.45065789473684 72 32 71.1 0 36 251 171 242 RLE52379.1 MAG: hypothetical protein DRJ26_04795, partial [Candidatus Methanomethylicota archaeon] diamond 441 74.7 1 Archaea   Thermoproteati Candidatus Methanomethylicota         Candidatus Methanomethylicota archaeon
31335122 31335122 PRJNA1148190_P_NODE_488976_length_269_cov_1.163265_g477803_i0 PRJNA1148190 488976 269 1.163265 3.12918285 Candidatus Methanomethylicaceae archaeon 2282146 Archaea Archaea 56.6 8.62e-8   NR MEM4202901.1 3058293 g477803 i0 51.5 1.4275092936803 66 32 73.6 0 72 269 10 75 MEM4202901.1 hypothetical protein [Candidatus Methanomethylicaceae archaeon] diamond 384 56.6 1 Archaea   Thermoproteati Candidatus Methanomethylicota Candidatus Methanomethylicia Candidatus Methanomethylicales Candidatus Methanomethylicaceae   Candidatus Methanomethylicaceae archaeon
32474348 32474348 PRJNA1148190_P_NODE_50719_length_839_cov_2.249347_g39916_i0 PRJNA1148190 50719 839 2.249347 18.87202133 Candidatus Methanomethylicota archaeon 2056631 Archaea Archaea 166 2.7799999999999993e-46   NR RLE52379.1 2250257 g39916 i0 41.1 0.825983313468415 231 131 81.9 4 834 148 16 243 RLE52379.1 MAG: hypothetical protein DRJ26_04795, partial [Candidatus Methanomethylicota archaeon] diamond 693 166 1 Archaea   Thermoproteati Candidatus Methanomethylicota         Candidatus Methanomethylicota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;