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contig_metadata

10 rows where analysis = "diamond", bioproject = "PRJNA1148190" and tax_phylum = "Candidatus Komeiliibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Komeiliibacteriota · 10 ✖

tax_clade 1

bioproject 1

  • PRJNA1148190 · 10 ✖

analysis 1

  • diamond · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24526573 24526573 PRJNA1148190_P_NODE_8900_length_3599_cov_2.972206_g4449_i0 PRJNA1148190 8900 3599 2.972206 106.96969394 Bacteria 2 Bacteria Bacteria 303 7.5e-83   NR OGY91739.1 1798551 g4449 i0 75.5 7.12364545707141 192 47 16 0 3019 3594 1 192 OGY91739.1 MAG: excinuclease ABC subunit A [Candidatus Komeilibacteria bacterium RIFCSPLOWO2_01_FULL_52_15] diamond 25638 306 0.990196078431373 Bacteria Bacteria candidate phyla   Candidatus Komeiliibacteriota         Candidatus Komeilibacteria bacterium RIFCSPLOWO2_01_FULL_52_15
27849145 27849145 PRJNA1148190_P_NODE_628344_length_249_cov_0.875000_g617171_i0 PRJNA1148190 628344 249 0.875 2.17875 Bacteria 2 Bacteria Bacteria 96.7 6.449999999999999e-23   NR PIT90456.1 1974476 g617171 i0 53.1 2.95180722891566 81 38 97.6 0 1 243 65 145 PIT90456.1 MAG: elongation factor P [Candidatus Komeilibacteria bacterium CG10_big_fil_rev_8_21_14_0_10_41_13] diamond 735 97.4 0.992813141683778 Bacteria Bacteria candidate phyla   Candidatus Komeiliibacteriota         Candidatus Komeilibacteria bacterium CG10_big_fil_rev_8_21_14_0_10_41_13
28259634 28259634 PRJNA1148190_P_NODE_7546_length_4097_cov_2.529324_g3693_i0 PRJNA1148190 7546 4097 2.529324 103.62640428 Bacteria 2 Bacteria Bacteria 621 1.43e-200   NR PIT90475.1 1974476 g3693 i0 44.5 10.2462777642177 821 433 58.8 7 1688 4096 26 841 PIT90475.1 MAG: ATPase [Candidatus Komeilibacteria bacterium CG10_big_fil_rev_8_21_14_0_10_41_13] diamond 41979 621 1 Bacteria Bacteria candidate phyla   Candidatus Komeiliibacteriota         Candidatus Komeilibacteria bacterium CG10_big_fil_rev_8_21_14_0_10_41_13
29628829 29628829 PRJNA1148190_P_NODE_54710_length_793_cov_2.595833_g43810_i0 PRJNA1148190 54710 793 2.595833 20.58495569 Candidatus Komeilibacteria bacterium CG1 2053566 Bacteria Bacteria 201 2.3600000000000007e-59   NR PIT90491.1 1974476 g43810 i0 41.8 3.67717528373266 249 139 92.7 3 793 59 90 336 PIT90491.1 MAG: endolytic transglycosylase MltG [Candidatus Komeilibacteria bacterium CG10_big_fil_rev_8_21_14_0_10_41_13] diamond 2916 201 1 Bacteria Bacteria candidate phyla   Candidatus Komeiliibacteriota         Candidatus Komeilibacteria bacterium CG10_big_fil_rev_8_21_14_0_10_41_13
29629112 29629112 PRJNA1148190_P_NODE_696810_length_245_cov_1.372093_g685637_i0 PRJNA1148190 696810 245 1.372093 3.36162785 Candidatus Komeilibacteria bacterium CG11_big_fil_rev_8_21_14_ 2053566 Bacteria Bacteria 137 2.79e-37   NR PIR06282.1 1974477 g685637 i0 80 0.979591836734694 80 16 98 0 4 243 47 126 PIR06282.1 MAG: site-specific DNA-methyltransferase [Candidatus Komeilibacteria bacterium CG11_big_fil_rev_8_21_14_0_20_36_20] diamond 240 137 1 Bacteria Bacteria candidate phyla   Candidatus Komeiliibacteriota         Candidatus Komeilibacteria bacterium CG11_big_fil_rev_8_21_14_0_20_36_20
30008371 30008371 PRJNA1148190_P_NODE_534031_length_260_cov_1.368984_g522858_i0 PRJNA1148190 534031 260 1.368984 3.5593584 Candidatus Komeilibacteria bacterium CG11_big_fil_rev_8_21_14_ 2053566 Bacteria Bacteria 107 7.56e-25   NR PIR06682.1 1974477 g522858 i0 61.2 0.980769230769231 85 33 98.1 0 256 2 480 564 PIR06682.1 MAG: hypothetical protein COV55_02915 [Candidatus Komeilibacteria bacterium CG11_big_fil_rev_8_21_14_0_20_36_20] diamond 255 107 1 Bacteria Bacteria candidate phyla   Candidatus Komeiliibacteriota         Candidatus Komeilibacteria bacterium CG11_big_fil_rev_8_21_14_0_20_36_20
31239675 31239675 PRJNA1148190_P_NODE_172895_length_401_cov_1.984756_g161726_i0 PRJNA1148190 172895 401 1.984756 7.95887156 Candidatus Komeilibacteria bacterium CG_4_9_14_3_um_filter_37_5 1974474 Bacteria Bacteria 63.5 1.05e-8   NR PJA92463.1 1974474 g161726 i0 33.1 1.94513715710723 130 82 94.3 3 2 379 255 383 PJA92463.1 MAG: hypothetical protein CO133_03080, partial [Candidatus Komeilibacteria bacterium CG_4_9_14_3_um_filter_37_5] diamond 780 63.5 1 Bacteria Bacteria candidate phyla   Candidatus Komeiliibacteriota         Candidatus Komeilibacteria bacterium CG_4_9_14_3_um_filter_37_5
32284255 32284255 PRJNA1148190_P_NODE_29839_length_1295_cov_2.036007_g20240_i0 PRJNA1148190 29839 1295 2.036007 26.36629065 Candidatus Komeilibacteria bacterium 2053566 Bacteria Bacteria 445 4.6099999999999984e-148   NR MDP2586186.1 2053566 g20240 i0 56.7 3.62779922779923 379 157 87.6 2 1152 19 121 493 MDP2586186.1 VWA domain-containing protein [Candidatus Komeilibacteria bacterium] diamond 4698 445 1 Bacteria Bacteria candidate phyla   Candidatus Komeiliibacteriota         Candidatus Komeilibacteria bacterium
32651661 32651661 PRJNA1148190_P_NODE_78760_length_618_cov_1.366972_g67637_i0 PRJNA1148190 78760 618 1.366972 8.44788696 Bacteria 2 Bacteria Bacteria 207 4.7600000000000003e-63   NR OGY90739.1 1798552 g67637 i0 47.3 4.97572815533981 205 108 99.5 0 617 3 28 232 OGY90739.1 MAG: hypothetical protein A3B31_03715 [Candidatus Komeilibacteria bacterium RIFCSPLOWO2_01_FULL_53_11] diamond 3075 209 0.990430622009569 Bacteria Bacteria candidate phyla   Candidatus Komeiliibacteriota         Candidatus Komeilibacteria bacterium RIFCSPLOWO2_01_FULL_53_11
32821067 32821067 PRJNA1148190_P_NODE_567060_length_254_cov_1.011050_g555887_i0 PRJNA1148190 567060 254 1.01105 2.568067 Candidatus Komeilibacteria bacterium RIFCSPLOWO2_ 2053566 Bacteria Bacteria 49.7 2.83e-5   NR OGY91720.1 1798553 g555887 i0 60.5 0.507874015748031 43 17 50.8 0 254 126 71 113 OGY91720.1 MAG: hypothetical protein A3H70_02060 [Candidatus Komeilibacteria bacterium RIFCSPLOWO2_02_FULL_48_11] diamond 129 49.7 1 Bacteria Bacteria candidate phyla   Candidatus Komeiliibacteriota         Candidatus Komeilibacteria bacterium RIFCSPLOWO2_02_FULL_48_11

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;