RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1148190" and tax_phylum = "Candidatus Gerdarchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Gerdarchaeota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1148190 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29376932 29376932 PRJNA1148190_P_NODE_722369_length_244_cov_0.900585_g711196_i0 PRJNA1148190 722369 244 0.900585 2.1974274 Candidatus Gerdarchaeota archaeon 2795491 Archaea Archaea 62.8 3.14e-9   NR RLI70927.1 2795491 g711196 i0 57.1 1.30327868852459 56 22 67.6 2 24 188 294 348 RLI70927.1 MAG: elongation factor 1-alpha [Candidatus Gerdarchaeota archaeon] diamond 318 62.8 1 Archaea   Promethearchaeati Candidatus Gerdarchaeota         Candidatus Gerdarchaeota archaeon
32852798 32852798 PRJNA1148190_P_NODE_72060_length_654_cov_1.722892_g60968_i0 PRJNA1148190 72060 654 1.722892 11.26771368 Candidatus Gerdarchaeota archaeon 2795491 Archaea Archaea 59.3 2.36e-6   NR RLI68642.1 2795491 g60968 i0 34.3 0.467889908256881 102 62 45 2 648 355 127 227 RLI68642.1 MAG: hypothetical protein DRO63_02330 [Candidatus Gerdarchaeota archaeon] diamond 306 59.3 1 Archaea   Promethearchaeati Candidatus Gerdarchaeota         Candidatus Gerdarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;