RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA1148190" and tax_phylum = "Candidatus Curtissiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Curtissiibacteriota · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA1148190 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26691404 26691404 PRJNA1148190_P_NODE_477161_length_271_cov_1.358586_g465988_i0 PRJNA1148190 477161 271 1.358586 3.68176806 Candidatus Curtissbacteria bacterium GW2 2750075 Bacteria Bacteria 77.8 2.85e-15   NR KKR48083.1 1618405 g465988 i0 41.7 2.23616236162362 103 45 98.5 2 1 267 60 161 KKR48083.1 MAG: hypothetical protein UT84_C0051G0008 [Candidatus Curtissbacteria bacterium GW2011_GWA1_40_16] diamond 606 77.8 1 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium GW2011_GWA1_40_16
27912174 27912174 PRJNA1148190_P_NODE_325625_length_309_cov_2.572034_g314452_i0 PRJNA1148190 325625 309 2.572034 7.94758506 Bacillati 1783272 Bacteria Bacteria 63.9 8.46e-10   NR OGD92921.1 1797712 g314452 i0 42 8.57281553398058 69 40 67 0 267 61 6 74 OGD92921.1 MAG: repressor LexA [Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_01_FULL_41_44] diamond 2649 64.3 0.993779160186625 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_01_FULL_41_44
28523850 28523850 PRJNA1148190_P_NODE_300407_length_319_cov_3.292683_g289234_i0 PRJNA1148190 300407 319 3.292683 10.50365877 Candidatus Curtissbacteria bacterium 2750075 Bacteria Bacteria 126 2.8099999999999993e-31   NR MBI2327060.1 2750075 g289234 i0 59.4 4.85266457680251 101 41 95 0 309 7 414 514 MBI2327060.1 transketolase [Candidatus Curtissbacteria bacterium] diamond 1548 126 1 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium
30007935 30007935 PRJNA1148190_P_NODE_294571_length_322_cov_1.281124_g283398_i0 PRJNA1148190 294571 322 1.281124 4.12521928 Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_12_FULL_38_9b 1797720 Bacteria Bacteria 47 2.4e-4   NR OGD96595.1 1797720 g283398 i0 38.9 0.503105590062112 54 32 50.3 1 67 228 17 69 OGD96595.1 MAG: hypothetical protein A3F02_03230 [Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_12_FULL_38_9b] diamond 162 47 1 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_12_FULL_38_9b
31228350 31228350 PRJNA1148190_P_NODE_105175_length_519_cov_2.730942_g94018_i0 PRJNA1148190 105175 519 2.730942 14.17358898 Bacteria 2 Bacteria Bacteria 53.9 4.49e-5   NR KKR65208.1 1618407 g94018 i0 31.4 2.13294797687861 102 62 57.2 2 1 297 153 249 KKR65208.1 MAG: Phage protein [Candidatus Curtissbacteria bacterium GW2011_GWA1_40_47] diamond 1107 54.3 0.992633517495396 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium GW2011_GWA1_40_47
31418310 31418310 PRJNA1148190_P_NODE_283196_length_327_cov_1.354331_g272025_i0 PRJNA1148190 283196 327 1.354331 4.42866237 Bacteria 2 Bacteria Bacteria 110 3.03e-27   NR KKQ89728.1 1618414 g272025 i0 52.8 3.20183486238532 89 41 80.7 1 327 64 145 233 KKQ89728.1 MAG: hypothetical protein UT12_C0009G0037 [Candidatus Curtissbacteria bacterium GW2011_GWC2_38_9] diamond 1047 110 1 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium GW2011_GWC2_38_9
32663258 32663258 PRJNA1148190_P_NODE_454300_length_275_cov_2.138614_g443127_i0 PRJNA1148190 454300 275 2.138614 5.8811885 Candidatus Curtissbacteria bacterium 2750075 Bacteria Bacteria 63.9 1.84e-9   NR MBI2327226.1 2750075 g443127 i0 37.6 0.927272727272727 85 53 92.7 0 259 5 292 376 MBI2327226.1 hypothetical protein [Candidatus Curtissbacteria bacterium] diamond 255 63.9 1 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;