contig_metadata
19 rows where analysis = "diamond", bioproject = "PRJNA1146029" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7943092 | 7943092 | PRJNA1146029_P_NODE_12907_length_272_cov_1.547739_g12626_i0 | PRJNA1146029 | 12907 | 272 | 1.547739 | 4.20985008 | Bacteria | 2 | Bacteria | Bacteria | 167 | 6.469999999999999e-46 | NR | MBI2515963.1 | 2026771 | g12626 | i0 | 88.9 | 2.97794117647059 | 90 | 10 | 99.3 | 0 | 271 | 2 | 164 | 253 | MBI2515963.1 glutamate synthase large subunit [Opitutia bacterium] | diamond | 810 | 167 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutia bacterium | ||||
| 26647754 | 26647754 | PRJNA1146029_P_NODE_20721_length_243_cov_0.905882_g20440_i0 | PRJNA1146029 | 20721 | 243 | 0.905882 | 2.20129326 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 128 | 1.03e-33 | NR | HEY5227254.1 | 2006848 | g20440 | i0 | 80.6 | 8.75308641975309 | 72 | 14 | 88.9 | 0 | 241 | 26 | 292 | 363 | HEY5227254.1 CocE/NonD family hydrolase [Opitutaceae bacterium] | diamond | 2127 | 129 | 0.992248062015504 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 27007151 | 27007151 | PRJNA1146029_P_NODE_16742_length_250_cov_0.870056_g16461_i0 | PRJNA1146029 | 16742 | 250 | 0.870056 | 2.17514 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 77 | 5.12e-15 | NR | HEY1788369.1 | 2499141 | g16461 | i0 | 58.9 | 0.876 | 73 | 28 | 85.2 | 2 | 245 | 33 | 147 | 219 | HEY1788369.1 PEP-CTERM sorting domain-containing protein [Verrucomicrobiia bacterium] | diamond | 219 | 77 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 27091134 | 27091134 | PRJNA1146029_P_NODE_14882_length_258_cov_1.664865_g14601_i0 | PRJNA1146029 | 14882 | 258 | 1.664865 | 4.2953517 | Bacteria | 2 | Bacteria | Bacteria | 78.2 | 1.54e-14 | NR | TMP90165.1 | 2026799 | g14601 | i0 | 57.3 | 3.63953488372093 | 75 | 32 | 87.2 | 0 | 31 | 255 | 593 | 667 | TMP90165.1 MAG: tetratricopeptide repeat protein [Verrucomicrobiota bacterium] | diamond | 939 | 78.2 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 27449986 | 27449986 | PRJNA1146029_P_NODE_15023_length_257_cov_1.673913_g14742_i0 | PRJNA1146029 | 15023 | 257 | 1.673913 | 4.30195641 | Opitutia bacterium | 2026771 | Bacteria | Bacteria | 77.4 | 3.84e-16 | NR | MAL85640.1 | 2026771 | g14742 | i0 | 82.2 | 0.525291828793774 | 45 | 8 | 52.5 | 0 | 121 | 255 | 1 | 45 | MAL85640.1 nucleotide pyrophosphohydrolase [Opitutia bacterium] | diamond | 135 | 77.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutia bacterium | ||||
| 27943965 | 27943965 | PRJNA1146029_P_NODE_14945_length_258_cov_1.248649_g14664_i0 | PRJNA1146029 | 14945 | 258 | 1.248649 | 3.22151442 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 52.4 | 1.82e-5 | NR | HVW22076.1 | 2006848 | g14664 | i0 | 44.4 | 4.36046511627907 | 81 | 35 | 88.4 | 3 | 16 | 243 | 113 | 188 | HVW22076.1 tetratricopeptide repeat protein [Opitutaceae bacterium] | diamond | 1125 | 52.8 | 0.992424242424242 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 28133486 | 28133486 | PRJNA1146029_P_NODE_14305_length_262_cov_2.063492_g14024_i0 | PRJNA1146029 | 14305 | 262 | 2.063492 | 5.40634904 | Opitutus | 178440 | Bacteria | Bacteria | 112 | 1.06e-26 | NR | MSU24673.1 | 1913982 | g14024 | i0 | 58.1 | 1.96946564885496 | 86 | 36 | 98.5 | 0 | 260 | 3 | 461 | 546 | MSU24673.1 amidase [Opitutus sp.] | diamond | 516 | 112 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. | |
| 28144655 | 28144655 | PRJNA1146029_P_NODE_21125_length_243_cov_0.905882_g20844_i0 | PRJNA1146029 | 21125 | 243 | 0.905882 | 2.20129326 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 55.8 | 9e-7 | NR | RYD66550.1 | 2026800 | g20844 | i0 | 41.6 | 0.950617283950617 | 77 | 45 | 95.1 | 0 | 3 | 233 | 839 | 915 | RYD66550.1 MAG: ATP-binding protein [Verrucomicrobiaceae bacterium] | diamond | 231 | 55.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 28385904 | 28385904 | PRJNA1146029_P_NODE_19106_length_246_cov_0.890173_g18825_i0 | PRJNA1146029 | 19106 | 246 | 0.890173 | 2.18982558 | Bacteria | 2 | Bacteria | Bacteria | 112 | 5.03e-27 | NR | MEM9016119.1 | 2026799 | g18825 | i0 | 63 | 3.95121951219512 | 81 | 30 | 98.8 | 0 | 245 | 3 | 97 | 177 | MEM9016119.1 beta-ketoacyl-[acyl-carrier-protein] synthase family protein [Verrucomicrobiota bacterium] | diamond | 972 | 112 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 28480680 | 28480680 | PRJNA1146029_P_NODE_18046_length_248_cov_0.880000_g17765_i0 | PRJNA1146029 | 18046 | 248 | 0.88 | 2.1824 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 155 | 4.74e-44 | NR | HXU59272.1 | 2499141 | g17765 | i0 | 85.4 | 15.8709677419355 | 82 | 12 | 99.2 | 0 | 248 | 3 | 82 | 163 | HXU59272.1 aldo/keto reductase [Verrucomicrobiia bacterium] | diamond | 3936 | 155 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 28586639 | 28586639 | PRJNA1146029_P_NODE_8487_length_311_cov_1.294118_g8206_i0 | PRJNA1146029 | 8487 | 311 | 1.294118 | 4.02470698 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 68.6 | 6.86e-11 | NR | MEO6181703.1 | 2026799 | g8206 | i0 | 42 | 0.964630225080386 | 100 | 57 | 95.5 | 1 | 10 | 306 | 339 | 438 | MEO6181703.1 TIGR04222 domain-containing membrane protein [Verrucomicrobiota bacterium] | diamond | 300 | 68.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 29616955 | 29616955 | PRJNA1146029_P_NODE_7750_length_323_cov_1.232000_g7471_i0 | PRJNA1146029 | 7750 | 323 | 1.232 | 3.97936 | root | 1 | Root_unresolved | Root_unresolved | 101 | 2.78e-22 | NR | MEY2479147.1 | 2026799 | g7471 | i0 | 46.6 | 3.79876160990712 | 103 | 55 | 95.7 | 0 | 316 | 8 | 178 | 280 | MEY2479147.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 1227 | 101 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 29912783 | 29912783 | PRJNA1146029_P_NODE_15571_length_253_cov_1.555556_g15290_i0 | PRJNA1146029 | 15571 | 253 | 1.555556 | 3.93555668 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 116 | 2.31e-29 | NR | MBE0540231.1 | 2026799 | g15290 | i0 | 60.7 | 0.99604743083004 | 84 | 33 | 99.6 | 0 | 252 | 1 | 166 | 249 | MBE0540231.1 phosphodiester glycosidase family protein [Verrucomicrobiota bacterium] | diamond | 252 | 116 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 30702469 | 30702469 | PRJNA1146029_P_NODE_21454_length_242_cov_0.911243_g21173_i0 | PRJNA1146029 | 21454 | 242 | 0.911243 | 2.20520806 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 95.1 | 1.17e-20 | NR | HUJ11825.1 | 2499141 | g21173 | i0 | 63 | 1.84710743801653 | 73 | 27 | 90.5 | 0 | 23 | 241 | 40 | 112 | HUJ11825.1 lipase maturation factor family protein [Verrucomicrobiia bacterium] | diamond | 447 | 95.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 31039231 | 31039231 | PRJNA1146029_P_NODE_19055_length_246_cov_0.890173_g18774_i0 | PRJNA1146029 | 19055 | 246 | 0.890173 | 2.18982558 | Bacteria | 2 | Bacteria | Bacteria | 123 | 1.2499999999999999e-31 | NR | MEO0452574.1 | 2026799 | g18774 | i0 | 76.9 | 9.53658536585366 | 78 | 18 | 95.1 | 0 | 236 | 3 | 136 | 213 | MEO0452574.1 alkene reductase [Verrucomicrobiota bacterium] | diamond | 2346 | 124 | 0.991935483870968 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 31524437 | 31524437 | PRJNA1146029_P_NODE_20016_length_244_cov_2.052632_g19735_i0 | PRJNA1146029 | 20016 | 244 | 2.052632 | 5.00842208 | Pedosphaera sp. | 2024890 | Bacteria | Bacteria | 43.1 | 0.0271 | NR | MSU41697.1 | 2024890 | g19735 | i0 | 43.2 | 0.540983606557377 | 44 | 24 | 52.9 | 1 | 208 | 80 | 344 | 387 | MSU41697.1 Gfo/Idh/MocA family oxidoreductase [Pedosphaera sp.] | diamond | 132 | 43.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera sp. | |
| 31872174 | 31872174 | PRJNA1146029_P_NODE_12797_length_273_cov_1.340000_g12516_i0 | PRJNA1146029 | 12797 | 273 | 1.34 | 3.6582 | Rariglobus sp. | 2706526 | Bacteria | Bacteria | 50.4 | 1.61e-5 | NR | MET0263957.1 | 2706526 | g12516 | i0 | 68.6 | 0.769230769230769 | 35 | 11 | 38.5 | 0 | 110 | 6 | 1 | 35 | MET0263957.1 BON domain-containing protein [Rariglobus sp.] | diamond | 210 | 50.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Rariglobus | Rariglobus sp. | |
| 32030569 | 32030569 | PRJNA1146029_P_NODE_8598_length_310_cov_2.118143_g8317_i0 | PRJNA1146029 | 8598 | 310 | 2.118143 | 6.5662433 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 107 | 1.62e-25 | NR | MDP4937962.1 | 2026801 | g8317 | i0 | 98 | 0.948387096774194 | 49 | 1 | 47.4 | 0 | 3 | 149 | 30 | 78 | MDP4937962.1 DUF1552 domain-containing protein [Verrucomicrobiales bacterium] | diamond | 294 | 107 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 32188735 | 32188735 | PRJNA1146029_P_NODE_12478_length_275_cov_1.361386_g12197_i0 | PRJNA1146029 | 12478 | 275 | 1.361386 | 3.7438115 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 107 | 1.07e-25 | NR | MCZ6672608.1 | 2026799 | g12197 | i0 | 57.6 | 0.927272727272727 | 85 | 36 | 92.7 | 0 | 262 | 8 | 2 | 86 | MCZ6672608.1 SGNH/GDSL hydrolase family protein [Verrucomicrobiota bacterium] | diamond | 255 | 107 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;