contig_metadata
10 rows where analysis = "diamond", bioproject = "PRJNA1145997" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15592607 | 15592607 | PRJNA1145997_P_NODE_50553_length_228_cov_3.909677_g47934_i0 | PRJNA1145997 | 50553 | 228 | 3.909677 | 8.91406356 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 125 | 8.229999999999999e-32 | NR | MCC7519260.1 | 2499141 | g47934 | i0 | 91.3 | 2.72368421052632 | 69 | 6 | 90.8 | 0 | 20 | 226 | 318 | 386 | MCC7519260.1 chaperonin GroEL [Verrucomicrobiia bacterium] | diamond | 621 | 125 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 26943908 | 26943908 | PRJNA1145997_P_NODE_47102_length_245_cov_0.906977_g44483_i0 | PRJNA1145997 | 47102 | 245 | 0.906977 | 2.22209365 | Opitutaceae bacterium | 2006848 | Bacteria | Bacteria | 130 | 9.94e-34 | NR | MEO6567161.1 | 2006848 | g44483 | i0 | 71.6 | 0.991836734693878 | 81 | 23 | 99.2 | 0 | 243 | 1 | 182 | 262 | MEO6567161.1 DUF1592 domain-containing protein [Opitutaceae bacterium] | diamond | 243 | 130 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 27544551 | 27544551 | PRJNA1145997_P_NODE_43404_length_251_cov_0.876404_g40785_i0 | PRJNA1145997 | 43404 | 251 | 0.876404 | 2.19977404 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 77 | 3.4e-14 | NR | MEK7340032.1 | 2026799 | g40785 | i0 | 97.3 | 0.884462151394422 | 37 | 1 | 44.2 | 0 | 112 | 2 | 1 | 37 | MEK7340032.1 excinuclease ABC subunit UvrB [Verrucomicrobiota bacterium] | diamond | 222 | 77 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 27765738 | 27765738 | PRJNA1145997_P_NODE_48244_length_243_cov_1.376471_g45625_i0 | PRJNA1145997 | 48244 | 243 | 1.376471 | 3.34482453 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 129 | 5.38e-36 | NR | MDP4792931.1 | 2026801 | g45625 | i0 | 76.3 | 3.93827160493827 | 80 | 19 | 98.8 | 0 | 242 | 3 | 76 | 155 | MDP4792931.1 YbjN domain-containing protein [Verrucomicrobiales bacterium] | diamond | 957 | 129 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 28238941 | 28238941 | PRJNA1145997_P_NODE_42946_length_252_cov_0.871508_g40327_i0 | PRJNA1145997 | 42946 | 252 | 0.871508 | 2.19620016 | Roseimicrobium gellanilyticum | 748857 | Bacteria | Bacteria | 117 | 1.74e-28 | NR | WP_147263542.1 | 748857 | g40327 | i0 | 65.4 | 0.964285714285714 | 81 | 28 | 96.4 | 0 | 252 | 10 | 1519 | 1599 | WP_147263542.1 discoidin domain-containing protein [Roseimicrobium gellanilyticum] | diamond | 243 | 117 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Roseimicrobium | Roseimicrobium gellanilyticum | |
| 29470225 | 29470225 | PRJNA1145997_P_NODE_46890_length_245_cov_1.813953_g44271_i0 | PRJNA1145997 | 46890 | 245 | 1.813953 | 4.44418485 | Opitutus sp. | 1913982 | Bacteria | Bacteria | 137 | 8.31e-36 | NR | MCS6244044.1 | 1913982 | g44271 | i0 | 83.3 | 0.955102040816327 | 78 | 13 | 95.5 | 0 | 1 | 234 | 177 | 254 | MCS6244044.1 hypothetical protein [Opitutus sp.] | diamond | 234 | 137 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. | |
| 30028023 | 30028023 | PRJNA1145997_P_NODE_36851_length_290_cov_2.672811_g34232_i0 | PRJNA1145997 | 36851 | 290 | 2.672811 | 7.7511519 | Bacteria | 2 | Bacteria | Bacteria | 173 | 9.27e-48 | NR | MBP6782823.1 | 2026801 | g34232 | i0 | 90.1 | 5.60689655172414 | 91 | 9 | 94.1 | 0 | 273 | 1 | 431 | 521 | MBP6782823.1 [protein-PII] uridylyltransferase [Verrucomicrobiales bacterium] | diamond | 1626 | 173 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 30817766 | 30817766 | PRJNA1145997_P_NODE_50534_length_228_cov_5.361290_g47915_i0 | PRJNA1145997 | 50534 | 228 | 5.36129 | 12.2237412 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 106 | 4.19e-26 | NR | MBL9138937.1 | 2026801 | g47915 | i0 | 82.3 | 4.31578947368421 | 62 | 11 | 81.6 | 0 | 12 | 197 | 110 | 171 | MBL9138937.1 PH domain-containing protein [Verrucomicrobiales bacterium] | diamond | 984 | 106 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 31650636 | 31650636 | PRJNA1145997_P_NODE_49397_length_242_cov_0.887574_g46778_i0 | PRJNA1145997 | 49397 | 242 | 0.887574 | 2.14792908 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 71.6 | 2.48e-12 | NR | MDB6062098.1 | 2026800 | g46778 | i0 | 49.3 | 0.929752066115702 | 75 | 36 | 93 | 1 | 225 | 1 | 859 | 931 | MDB6062098.1 hypothetical protein [Verrucomicrobiaceae bacterium] | diamond | 225 | 71.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 32568566 | 32568566 | PRJNA1145997_P_NODE_44459_length_249_cov_1.255682_g41840_i0 | PRJNA1145997 | 44459 | 249 | 1.255682 | 3.12664818 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 75.9 | 8.83e-14 | NR | MBX7211201.1 | 2026800 | g41840 | i0 | 84.6 | 0.963855421686747 | 39 | 6 | 47 | 0 | 123 | 7 | 1 | 39 | MBX7211201.1 asparagine synthase (glutamine-hydrolyzing) [Verrucomicrobiaceae bacterium] | diamond | 240 | 75.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;