RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1145997" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1145997 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30892221 30892221 PRJNA1145997_P_NODE_41054_length_259_cov_7.279570_g38435_i0 PRJNA1145997 41054 259 7.27957 18.8540863 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 53.5 7.23e-6   NR CAF1121289.1 1234261 g38435 i0 45 1.85328185328185 80 31 88 4 247 20 611 681 CAF1121289.1 unnamed protein product [Didymodactylos carnosus] diamond 480 53.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus
31492839 31492839 PRJNA1145997_P_NODE_37076_length_288_cov_3.548837_g34457_i0 PRJNA1145997 37076 288 3.548837 10.22065056 Brachionus plicatilis 10195 Rotifera other_Eukaryota 135 1.87e-39   NR RNA36285.1 10195 g34457 i0 79.5 0.8125 78 16 81.3 0 3 236 6 83 RNA36285.1 40S ribosomal S21 [Brachionus plicatilis] diamond 234 135 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;