RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1145997" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1145997 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26595481 26595481 PRJNA1145997_P_NODE_30701_length_371_cov_1.100671_g28082_i0 PRJNA1145997 30701 371 1.100671 4.08348941 Mucor circinelloides 1 36080 Fungi Fungi 59.3 2.21e-7   NR EPB90241.1 1220926 g28082 i0 34 1.55256064690027 97 62 78.4 2 295 5 28 122 EPB90241.1 hypothetical protein HMPREF1544_02927 [Mucor circinelloides 1006PhL] diamond 576 59.3 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor circinelloides
32694138 32694138 PRJNA1145997_P_NODE_23440_length_572_cov_14.230461_g20832_i0 PRJNA1145997 23440 572 14.230461 81.39823692 Rhizophagus irregularis 588596 Fungi Fungi 47.8 0.0124   NR XP_025185428.1 588596 g20832 i0 33.8 0.372377622377622 71 37 32 2 263 445 356 426 XP_025185428.1 uncharacterized protein OCT59_006909 [Rhizophagus irregularis] diamond 213 47.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus irregularis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;