RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1145997" and tax_kingdom = "Nanobdellati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Nanobdellati · 2 ✖

bioproject 1

  • PRJNA1145997 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30639146 30639146 PRJNA1145997_P_NODE_44753_length_249_cov_0.886364_g42134_i0 PRJNA1145997 44753 249 0.886364 2.20704636 Nanobdellota archaeon 2026764 Archaea Archaea 158 6.779999999999998e-43   NR MDP2906499.1 2026764 g42134 i0 100 1 83 0 100 0 1 249 568 650 MDP2906499.1 AAA family ATPase [Nanoarchaeota archaeon] diamond 249 158 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
32442054 32442054 PRJNA1145997_P_NODE_50219_length_232_cov_3.044025_g47600_i0 PRJNA1145997 50219 232 3.044025 7.062138 Candidatus Nanoarchaeia archaeon 2910166 Archaea Archaea 84.7 6.94e-19   NR HLC78770.1 2910166 g47600 i0 56.3 0.918103448275862 71 31 91.8 0 232 20 40 110 HLC78770.1 hypothetical protein [Candidatus Nanoarchaeia archaeon] diamond 213 84.7 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia       Candidatus Nanoarchaeia archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;