contig_metadata
9 rows where analysis = "diamond", bioproject = "PRJNA1145574" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27438988 | 27438988 | PRJNA1145574_P_NODE_14243_length_244_cov_0.912281_g14059_i0 | PRJNA1145574 | 14243 | 244 | 0.912281 | 2.22596564 | Bacteria | 2 | Bacteria | Bacteria | 162 | 1.96e-48 | NR | KRO30988.1 | 1655568 | g14059 | i0 | 98.8 | 1.9672131147541 | 80 | 1 | 98.4 | 0 | 242 | 3 | 79 | 158 | KRO30988.1 MAG: ubiquinone biosynthesis methyltransferase UbiE [Actinobacteria bacterium BACL2 MAG-120802-bin41] | diamond | 480 | 162 | 1 | Bacteria | ac1 cluster | Bacillati | Actinomycetota | Actinomycetes | Actinobacteria bacterium BACL2 MAG-120802-bin41 | ||||
| 27817791 | 27817791 | PRJNA1145574_P_NODE_14804_length_242_cov_0.923077_g14620_i0 | PRJNA1145574 | 14804 | 242 | 0.923077 | 2.23384634 | Clavibacter | 1573 | Bacteria | Bacteria | 156 | 1.84e-44 | NR | MFO0196973.1 | 1871044 | g14620 | i0 | 100 | 5.9504132231405 | 80 | 0 | 99.2 | 0 | 242 | 3 | 59 | 138 | MFO0196973.1 lysine--tRNA ligase [Clavibacter sp.] | diamond | 1440 | 156 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Clavibacter | Clavibacter sp. | ||
| 27943959 | 27943959 | PRJNA1145574_P_NODE_13765_length_245_cov_0.906977_g13581_i0 | PRJNA1145574 | 13765 | 245 | 0.906977 | 2.22209365 | Bacteria | 2 | Bacteria | Bacteria | 166 | 3.36e-50 | NR | KRO30986.1 | 1655568 | g13581 | i0 | 97.5 | 22.7755102040816 | 81 | 2 | 99.2 | 0 | 1 | 243 | 63 | 143 | KRO30986.1 MAG: NADH dehydrogenase [Actinobacteria bacterium BACL2 MAG-120802-bin41] | diamond | 5580 | 166 | 1 | Bacteria | ac1 cluster | Bacillati | Actinomycetota | Actinomycetes | Actinobacteria bacterium BACL2 MAG-120802-bin41 | ||||
| 29565189 | 29565189 | PRJNA1145574_P_NODE_14010_length_244_cov_1.368421_g13826_i0 | PRJNA1145574 | 14010 | 244 | 1.368421 | 3.33894724 | Sciscionella sediminilitoris | 1445613 | Bacteria | Bacteria | 76.3 | 4.82e-14 | NR | WP_031469109.1 | 1445613 | g13826 | i0 | 47.5 | 2.00409836065574 | 80 | 38 | 97.1 | 2 | 243 | 7 | 252 | 328 | WP_031469109.1 NAD-dependent epimerase/dehydratase family protein [Sciscionella sediminilitoris] | diamond | 489 | 76.3 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Sciscionella | Sciscionella sediminilitoris | ||
| 29722814 | 29722814 | PRJNA1145574_P_NODE_11290_length_252_cov_0.871508_g11106_i0 | PRJNA1145574 | 11290 | 252 | 0.871508 | 2.19620016 | Actinomycetota bacterium | 2900548 | Bacteria | Bacteria | 144 | 1.52e-40 | NR | NBY82603.1 | 2900548 | g11106 | i0 | 89.2 | 4.94047619047619 | 83 | 9 | 98.8 | 0 | 2 | 250 | 207 | 289 | NBY82603.1 TIGR01777 family protein [Actinomycetota bacterium] | diamond | 1245 | 144 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetota bacterium | ||||||
| 29817678 | 29817678 | PRJNA1145574_P_NODE_11211_length_253_cov_0.866667_g11027_i0 | PRJNA1145574 | 11211 | 253 | 0.866667 | 2.19266751 | Amycolatopsis sp. NPDC | 37632 | Bacteria | Bacteria | 126 | 2.3e-34 | NR | WP_364623099.1 | 3155800 | g11027 | i0 | 87 | 0.91304347826087 | 77 | 10 | 91.3 | 0 | 251 | 21 | 125 | 201 | WP_364623099.1 TetR/AcrR family transcriptional regulator [Amycolatopsis sp. NPDC051371] | diamond | 231 | 126 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Amycolatopsis | Amycolatopsis sp. NPDC051371 | ||
| 30260381 | 30260381 | PRJNA1145574_P_NODE_9232_length_283_cov_1.261905_g9048_i0 | PRJNA1145574 | 9232 | 283 | 1.261905 | 3.57119115 | Microbacteriaceae bacterium | 1873462 | Bacteria | Bacteria | 121 | 1.25e-33 | NR | MDQ1532072.1 | 1873462 | g9048 | i0 | 59.1 | 0.985865724381625 | 93 | 38 | 98.6 | 0 | 1 | 279 | 5 | 97 | MDQ1532072.1 hypothetical protein [Microbacteriaceae bacterium] | diamond | 279 | 121 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacteriaceae bacterium | |||
| 31366325 | 31366325 | PRJNA1145574_P_NODE_13176_length_247_cov_0.896552_g12992_i0 | PRJNA1145574 | 13176 | 247 | 0.896552 | 2.21448344 | Solirubrobacterales bacterium | 1909295 | Bacteria | Bacteria | 43.9 | 0.0151 | NR | HEX3562609.1 | 1909295 | g12992 | i0 | 40 | 0.607287449392713 | 50 | 30 | 60.7 | 0 | 152 | 3 | 745 | 794 | HEX3562609.1 Coagulation factor 5/8 type domain-containing protein [Solirubrobacterales bacterium] | diamond | 150 | 43.9 | 1 | Bacteria | Bacillati | Actinomycetota | Thermoleophilia | Solirubrobacterales | Solirubrobacterales bacterium | ||||
| 31650618 | 31650618 | PRJNA1145574_P_NODE_11977_length_250_cov_0.881356_g11793_i0 | PRJNA1145574 | 11977 | 250 | 0.881356 | 2.20339 | Acidimicrobiales bacterium | 2201156 | Bacteria | Bacteria | 43.9 | 0.0148 | NR | HVM03280.1 | 2201156 | g11793 | i0 | 37.5 | 0.864 | 72 | 37 | 76.8 | 1 | 12 | 203 | 292 | 363 | HVM03280.1 glycosyltransferase [Acidimicrobiales bacterium] | diamond | 216 | 43.9 | 1 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiales | Acidimicrobiales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;