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contig_metadata

16 rows where analysis = "diamond", bioproject = "PRJNA1145574" and tax_kingdom = "Metazoa"

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tax_superkingdom 1

tax_kingdom 1

  • Metazoa · 16 ✖

tax_clade 1

bioproject 1

  • PRJNA1145574 · 16 ✖

analysis 1

  • diamond · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4115744 4115744 PRJNA1145574_P_NODE_64_length_2317_cov_4.367647_g43_i0 PRJNA1145574 64 2317 4.367647 101.19838099 Metazoa 33208 Mollusca Mollusca 725 2.0599999999999996e-252   NR XP_013082114.1 6526 g43 i0 62.6 182.922313336211 594 204 74.7 2 2299 569 7 599 XP_013082114.1 heat shock 70 kDa protein cognate 4 [Biomphalaria glabrata] diamond 423831 731 0.991792065663475 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Biomphalaria Biomphalaria glabrata
7941655 7941655 PRJNA1145574_P_NODE_10667_length_257_cov_1.271739_g10483_i0 PRJNA1145574 10667 257 1.271739 3.26836923 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 130 6.92e-36   NR MCL4117824.1 82763 g10483 i0 68.2 7.85603112840467 85 27 99.2 0 256 2 50 134 MCL4117824.1 hypothetical protein [Idotea baltica] diamond 2019 130 1 Eukaryota Opisthokonta Metazoa Arthropoda Malacostraca Isopoda Idoteidae Idotea Idotea baltica
28049675 28049675 PRJNA1145574_P_NODE_13505_length_246_cov_0.901734_g13321_i0 PRJNA1145574 13505 246 0.901734 2.21826564 Rangifer tarandus platyrhynchus 3082113 Chordata Chordata 124 2.9899999999999998e-34   NR CAI9154273.1 3082113 g13321 i0 82.7 0.914634146341463 75 13 91.5 0 22 246 1 75 CAI9154273.1 unnamed protein product [Rangifer tarandus platyrhynchus] diamond 225 124 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Rangifer Rangifer tarandus
28890937 28890937 PRJNA1145574_P_NODE_14848_length_242_cov_0.923077_g14664_i0 PRJNA1145574 14848 242 0.923077 2.23384634 Passeriformes 9126 Chordata Chordata 94.7 1.86e-20   NR XP_064267235.1 48849 g14664 i0 50 13.8223140495868 78 39 96.7 0 234 1 784 861 XP_064267235.1 endogenous retrovirus group K member 6 Pol protein [Passer domesticus] diamond 3345 94.7 1 Eukaryota Opisthokonta Metazoa Chordata Aves Passeriformes Passeridae Passer Passer domesticus
29091746 29091746 PRJNA1145574_P_NODE_9028_length_286_cov_1.361502_g8844_i0 PRJNA1145574 9028 286 1.361502 3.89389572 Crocuta crocuta 9678 Chordata Chordata 88.6 3.7e-19   NR KAF0884676.1 9678 g8844 i0 66.2 0.681818181818182 65 22 68.2 0 3 197 35 99 KAF0884676.1 LORF2 protein, partial [Crocuta crocuta] diamond 195 88.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Hyaenidae Crocuta Crocuta crocuta
29470209 29470209 PRJNA1145574_P_NODE_12710_length_248_cov_0.891429_g12526_i0 PRJNA1145574 12710 248 0.891429 2.21074392 Gryllus longicercus 2509291 Arthropoda Arthropoda 158 1.4200000000000001e-44   NR KAK7869359.1 2509291 g12526 i0 100 0.931451612903226 77 0 93.1 0 232 2 1 77 KAK7869359.1 hypothetical protein R5R35_012903 [Gryllus longicercus] diamond 231 158 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Orthoptera Gryllidae Gryllus Gryllus longicercus
29533672 29533672 PRJNA1145574_P_NODE_12090_length_250_cov_0.881356_g11906_i0 PRJNA1145574 12090 250 0.881356 2.20339 Lineus longissimus 88925 Nemertea other_Eukaryota 53.9 4.67e-6   NR XP_064629129.1 88925 g11906 i0 88 1.5 25 3 30 0 166 240 458 482 XP_064629129.1 asparagine synthetase [glutamine-hydrolyzing]-like [Lineus longissimus] diamond 375 53.9 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
30038923 30038923 PRJNA1145574_P_NODE_4351_length_399_cov_5.806748_g4167_i0 PRJNA1145574 4351 399 5.806748 23.16892452 Dimorphilus gyrociliatus 2664684 Annelida Annelida 83.6 1.17e-15   NR CAD5121248.1 2664684 g4167 i0 55.9 0.932330827067669 59 26 44.4 0 51 227 1043 1101 CAD5121248.1 DgyrCDS9780 [Dimorphilus gyrociliatus] diamond 372 83.6 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Dinophilidae Dimorphilus Dimorphilus gyrociliatus
30090895 30090895 PRJNA1145574_P_NODE_4132_length_408_cov_4.576119_g3948_i0 PRJNA1145574 4132 408 4.576119 18.67056552 Chironomidae 7149 Arthropoda Arthropoda 47.4 0.00467   NR CAG9807182.1 315576 g3948 i0 38.1 1.65441176470588 63 39 46.3 0 218 406 204 266 CAG9807182.1 unnamed protein product [Chironomus riparius] diamond 675 47.4 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Chironomidae Chironomus Chironomus riparius
30165154 30165154 PRJNA1145574_P_NODE_6192_length_344_cov_1.151292_g6008_i0 PRJNA1145574 6192 344 1.151292 3.96044448 Rissa tridactyla 75485 Chordata Chordata 52 6.68e-5   NR XP_054037764.1 75485 g6008 i0 58.3 0.418604651162791 48 20 41.9 0 243 100 543 590 XP_054037764.1 uncharacterized protein LOC128900532 [Rissa tridactyla] diamond 144 52 1 Eukaryota Opisthokonta Metazoa Chordata Aves Charadriiformes Laridae Rissa Rissa tridactyla
30355432 30355432 PRJNA1145574_P_NODE_4952_length_378_cov_2.347541_g4768_i0 PRJNA1145574 4952 378 2.347541 8.87370498 Glossina fuscipes 7396 Arthropoda Arthropoda 118 8.58e-31   NR XP_037894365.1 7396 g4768 i0 54.1 4.53174603174603 111 45 88.1 1 45 377 49 153 XP_037894365.1 ADP-ribose glycohydrolase OARD1 isoform X1 [Glossina fuscipes] diamond 1713 118 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Glossinidae Glossina Glossina fuscipes
30734032 30734032 PRJNA1145574_P_NODE_13134_length_247_cov_0.896552_g12950_i0 PRJNA1145574 13134 247 0.896552 2.21448344 Calidris pugnax 198806 Chordata Chordata 58.9 7.82e-8   NR XP_014808060.1 198806 g12950 i0 51.6 0.753036437246964 62 29 74.1 1 20 202 220 281 XP_014808060.1 PREDICTED: uncharacterized protein LOC106894085 [Calidris pugnax] diamond 186 58.9 1 Eukaryota Opisthokonta Metazoa Chordata Aves Charadriiformes Scolopacidae Calidris Calidris pugnax
31967004 31967004 PRJNA1145574_P_NODE_14618_length_243_cov_0.917647_g14434_i0 PRJNA1145574 14618 243 0.917647 2.22988221 Agelaius tricolor 9191 Chordata Chordata 42.7 0.0356   NR XP_071304911.1 9191 g14434 i0 42.4 0.814814814814815 66 36 81.5 1 199 2 62 125 XP_071304911.1 uncharacterized protein [Agelaius tricolor] diamond 198 42.7 1 Eukaryota Opisthokonta Metazoa Chordata Aves Passeriformes Icteridae Agelaius Agelaius tricolor
32061990 32061990 PRJNA1145574_P_NODE_12778_length_248_cov_0.891429_g12594_i0 PRJNA1145574 12778 248 0.891429 2.21074392 Strongyloides ratti 34506 Nematoda Nematoda 130 1.16e-35   NR XP_024508765.1 34506 g12594 i0 73.8 9.67741935483871 80 21 96.8 0 241 2 6 85 XP_024508765.1 Splicing factor 3A subunit 2 [Strongyloides ratti] diamond 2400 130 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
32220311 32220311 PRJNA1145574_P_NODE_12318_length_249_cov_0.920455_g12134_i0 PRJNA1145574 12318 249 0.920455 2.29193295 Tupaia chinensis 246437 Chordata Chordata 56.6 5.22e-7   NR ELW65328.1 246437 g12134 i0 54.9 0.855421686746988 71 30 83.1 1 1 207 370 440 ELW65328.1 Pre-mRNA-splicing factor 38B [Tupaia chinensis] diamond 213 56.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Scandentia Tupaiidae Tupaia Tupaia chinensis
32840506 32840506 PRJNA1145574_P_NODE_6780_length_331_cov_1.189922_g6596_i0 PRJNA1145574 6780 331 1.189922 3.93864182 Opisthokonta 33154 Platyhelminthes Platyhelminthes 142 1.99e-40   NR KAA3677532.1 34504 g6596 i0 66.7 24.2447129909366 96 32 87 0 42 329 1 96 KAA3677532.1 Ras-related C3 botulinum toxin substrate 1 [Paragonimus westermani] diamond 8025 143 0.993006993006993 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Troglotrematidae Paragonimus Paragonimus westermani

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;