contig_metadata
53 rows where analysis = "diamond", bioproject = "PRJNA1145276" and tax_phylum = "Pseudomonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10492062 | 10492062 | PRJNA1145276_P_NODE_19509_length_241_cov_0.916667_g19452_i0 | PRJNA1145276 | 19509 | 241 | 0.916667 | 2.20916747 | Sphingobium sp. AS12 | 2849495 | Bacteria | Bacteria | 67.8 | 5.17e-11 | NR | WP_254798751.1 | 2849495 | g19452 | i0 | 69.8 | 0.535269709543568 | 43 | 13 | 53.5 | 0 | 66 | 194 | 292 | 334 | WP_254798751.1 endonuclease/exonuclease/phosphatase family protein [Sphingobium sp. AS12] | diamond | 129 | 67.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingobium | Sphingobium sp. AS12 | ||
| 26627375 | 26627375 | PRJNA1145276_P_NODE_18701_length_243_cov_0.905882_g18644_i0 | PRJNA1145276 | 18701 | 243 | 0.905882 | 2.20129326 | Escherichia coli | 562 | Bacteria | Bacteria | 41.2 | 0.0162 | NR | MDW4608164.1 | 562 | g18644 | i0 | 52.6 | 0.469135802469136 | 38 | 18 | 46.9 | 0 | 214 | 101 | 19 | 56 | MDW4608164.1 hypothetical protein [Escherichia coli] | diamond | 114 | 41.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 26658791 | 26658791 | PRJNA1145276_P_NODE_18741_length_243_cov_0.905882_g18684_i0 | PRJNA1145276 | 18741 | 243 | 0.905882 | 2.20129326 | Escherichia coli | 562 | Bacteria | Bacteria | 47.8 | 4.25e-5 | NR | RJK33917.1 | 562 | g18684 | i0 | 65.6 | 1.17283950617284 | 32 | 11 | 39.5 | 0 | 92 | 187 | 29 | 60 | RJK33917.1 hypothetical protein CMV54_26000 [Escherichia coli] | diamond | 285 | 47.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 27038884 | 27038884 | PRJNA1145276_P_NODE_9222_length_335_cov_1.469466_g9165_i0 | PRJNA1145276 | 9222 | 335 | 1.469466 | 4.9227111 | Escherichia coli | 562 | Bacteria | Bacteria | 63.9 | 3.91e-9 | NR | WP_265935246.1 | 562 | g9165 | i0 | 50.9 | 7.38805970149254 | 55 | 27 | 49.3 | 0 | 249 | 85 | 217 | 271 | WP_265935246.1 host specificity protein J, partial [Escherichia coli] | diamond | 2475 | 63.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 27070515 | 27070515 | PRJNA1145276_P_NODE_12542_length_287_cov_1.341121_g12485_i0 | PRJNA1145276 | 12542 | 287 | 1.341121 | 3.84901727 | Escherichia coli | 562 | Bacteria | Bacteria | 64.3 | 1.59e-9 | NR | WP_172945367.1 | 562 | g12485 | i0 | 42.7 | 116.811846689895 | 75 | 43 | 78.4 | 0 | 286 | 62 | 224 | 298 | WP_172945367.1 host specificity protein J, partial [Escherichia coli] | diamond | 33525 | 64.3 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 27091128 | 27091128 | PRJNA1145276_P_NODE_3682_length_509_cov_1.149083_g3625_i0 | PRJNA1145276 | 3682 | 509 | 1.149083 | 5.84883247 | root | 1 | Root_unresolved | Root_unresolved | 124 | 8.9099999999999993e-33 | NR | MCV5426276.1 | 562 | g3625 | i0 | 57.9 | 6.68369351669941 | 126 | 53 | 74.3 | 0 | 56 | 433 | 17 | 142 | MCV5426276.1 helix-turn-helix domain-containing protein [Escherichia coli] | diamond | 3402 | 125 | 0.992 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 27122355 | 27122355 | PRJNA1145276_P_NODE_17482_length_246_cov_1.323699_g17425_i0 | PRJNA1145276 | 17482 | 246 | 1.323699 | 3.25629954 | Bacteria | 2 | Bacteria | Bacteria | 162 | 1.59e-45 | NR | WP_171921453.1 | 562 | g17425 | i0 | 98.8 | 6 | 82 | 1 | 100 | 0 | 246 | 1 | 249 | 330 | WP_171921453.1 DNA ligase [Escherichia coli] | diamond | 1476 | 163 | 0.993865030674847 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 27153858 | 27153858 | PRJNA1145276_P_NODE_14262_length_267_cov_2.056701_g14205_i0 | PRJNA1145276 | 14262 | 267 | 2.056701 | 5.49139167 | FCB group | 1783270 | Bacteria | Bacteria | 80.1 | 4.92e-17 | NR | MBP3075880.1 | 470 | g14205 | i0 | 56.9 | 15.3370786516854 | 72 | 31 | 80.9 | 0 | 216 | 1 | 36 | 107 | MBP3075880.1 hypothetical protein [Acinetobacter baumannii] | diamond | 4095 | 80.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter baumannii | ||
| 27323469 | 27323469 | PRJNA1145276_P_NODE_15303_length_255_cov_1.269231_g15246_i0 | PRJNA1145276 | 15303 | 255 | 1.269231 | 3.23653905 | Stutzerimonas stutzeri | 316 | Bacteria | Bacteria | 58.9 | 3.58e-9 | NR | WP_219853451.1 | 316 | g15246 | i0 | 54.7 | 0.623529411764706 | 53 | 24 | 62.4 | 0 | 203 | 45 | 30 | 82 | WP_219853451.1 hypothetical protein, partial [Stutzerimonas stutzeri] | diamond | 159 | 58.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Stutzerimonas | Stutzerimonas stutzeri | ||
| 27438986 | 27438986 | PRJNA1145276_P_NODE_14843_length_261_cov_1.031915_g14786_i0 | PRJNA1145276 | 14843 | 261 | 1.031915 | 2.69329815 | Escherichia | 561 | Bacteria | Bacteria | 53.9 | 5.31e-6 | NR | HAX2052223.1 | 562 | g14786 | i0 | 40 | 1.98850574712644 | 60 | 36 | 69 | 0 | 181 | 2 | 289 | 348 | HAX2052223.1 phage portal protein [Escherichia coli] | diamond | 519 | 53.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 27639409 | 27639409 | PRJNA1145276_P_NODE_18664_length_243_cov_0.905882_g18607_i0 | PRJNA1145276 | 18664 | 243 | 0.905882 | 2.20129326 | Escherichia coli | 562 | Bacteria | Bacteria | 50.1 | 6.67e-6 | NR | WP_410242068.1 | 562 | g18607 | i0 | 54.5 | 0.54320987654321 | 44 | 20 | 54.3 | 0 | 222 | 91 | 9 | 52 | WP_410242068.1 hypothetical protein [Escherichia coli] | diamond | 132 | 50.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 27702690 | 27702690 | PRJNA1145276_P_NODE_824_length_1017_cov_4.738347_g785_i0 | PRJNA1145276 | 824 | 1017 | 4.738347 | 48.18898899 | Yersinia pestis | 632 | Bacteria | Bacteria | 65.9 | 1.65e-9 | NR | MDL1223685.1 | 632 | g785 | i0 | 53 | 0.389380530973451 | 66 | 31 | 19.5 | 0 | 192 | 389 | 30 | 95 | MDL1223685.1 hypothetical protein [Yersinia pestis] | diamond | 396 | 65.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Yersiniaceae | Yersinia | Yersinia pestis | ||
| 28238924 | 28238924 | PRJNA1145276_P_NODE_2366_length_628_cov_1.248649_g2310_i0 | PRJNA1145276 | 2366 | 628 | 1.248649 | 7.84151572 | Escherichia coli | 562 | Bacteria | Bacteria | 133 | 7.42e-32 | NR | EFC6890875.1 | 562 | g2310 | i0 | 56.1 | 65.8949044585987 | 155 | 68 | 74 | 0 | 134 | 598 | 886 | 1040 | EFC6890875.1 host specificity protein J [Escherichia coli] | diamond | 41382 | 133 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 28270504 | 28270504 | PRJNA1145276_P_NODE_12186_length_291_cov_1.197248_g12129_i0 | PRJNA1145276 | 12186 | 291 | 1.197248 | 3.48399168 | Escherichia coli DEC5E | 868159 | Bacteria | Bacteria | 88.6 | 7.670000000000001e-21 | NR | EHV50479.1 | 868159 | g12129 | i0 | 64.6 | 0.670103092783505 | 65 | 23 | 67 | 0 | 250 | 56 | 3 | 67 | EHV50479.1 hypothetical protein ECDEC5E_0458 [Escherichia coli DEC5E] | diamond | 195 | 88.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 28460341 | 28460341 | PRJNA1145276_P_NODE_18246_length_244_cov_1.350877_g18189_i0 | PRJNA1145276 | 18246 | 244 | 1.350877 | 3.29613988 | Escherichia coli | 562 | Bacteria | Bacteria | 58.5 | 1.06e-8 | NR | WP_160516105.1 | 562 | g18189 | i0 | 59.6 | 0.700819672131147 | 57 | 23 | 70.1 | 0 | 34 | 204 | 34 | 90 | WP_160516105.1 tyrosine-type recombinase/integrase, partial [Escherichia coli] | diamond | 171 | 58.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 28681339 | 28681339 | PRJNA1145276_P_NODE_13627_length_274_cov_2.298507_g13570_i0 | PRJNA1145276 | 13627 | 274 | 2.298507 | 6.29790918 | Escherichia coli | 562 | Bacteria | Bacteria | 58.9 | 6.72e-9 | NR | STE86717.1 | 562 | g13570 | i0 | 63.9 | 0.394160583941606 | 36 | 13 | 39.4 | 0 | 267 | 160 | 1 | 36 | STE86717.1 Prophage tail fiber domain protein [Escherichia coli] | diamond | 108 | 58.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 28681340 | 28681340 | PRJNA1145276_P_NODE_18807_length_243_cov_0.905882_g18750_i0 | PRJNA1145276 | 18807 | 243 | 0.905882 | 2.20129326 | Escherichia coli | 562 | Bacteria | Bacteria | 53.5 | 5.03e-6 | NR | GCL11899.1 | 562 | g18750 | i0 | 56.6 | 8.19753086419753 | 53 | 23 | 65.4 | 0 | 83 | 241 | 68 | 120 | GCL11899.1 hypothetical protein BvCmsD61A_04662 [Escherichia coli] | diamond | 1992 | 53.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 28681341 | 28681341 | PRJNA1145276_P_NODE_3347_length_532_cov_1.028322_g3290_i0 | PRJNA1145276 | 3347 | 532 | 1.028322 | 5.47067304 | Escherichia coli | 562 | Bacteria | Bacteria | 57.8 | 2.26e-6 | NR | WP_373891178.1 | 562 | g3290 | i0 | 60.5 | 0.857142857142857 | 76 | 30 | 42.9 | 0 | 504 | 277 | 163 | 238 | WP_373891178.1 phage tail protein, partial [Escherichia coli] | diamond | 456 | 57.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 28712811 | 28712811 | PRJNA1145276_P_NODE_13647_length_274_cov_1.532338_g13590_i0 | PRJNA1145276 | 13647 | 274 | 1.532338 | 4.19860612 | Candidatus Thiodiazotropha endolucinida | 1655433 | Bacteria | Bacteria | 113 | 2.88e-27 | NR | ODJ85636.1 | 1655433 | g13590 | i0 | 61.1 | 0.985401459854015 | 90 | 35 | 98.5 | 0 | 5 | 274 | 23 | 112 | ODJ85636.1 putative signal peptide peptidase SppA [Candidatus Thiodiazotropha endolucinida] | diamond | 270 | 113 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Chromatiales | Sedimenticolaceae | Candidatus Thiodiazotropha | Candidatus Thiodiazotropha endolucinida | ||
| 28775812 | 28775812 | PRJNA1145276_P_NODE_6967_length_381_cov_1.256494_g6910_i0 | PRJNA1145276 | 6967 | 381 | 1.256494 | 4.78724214 | Salmonella enterica subsp. enterica serovar Dessau | 2564349 | Bacteria | Bacteria | 47.4 | 2.31e-4 | NR | QUS47091.1 | 2564349 | g6910 | i0 | 64.7 | 0.267716535433071 | 34 | 12 | 26.8 | 0 | 133 | 32 | 2 | 35 | QUS47091.1 hypothetical protein F1331_25955 [Salmonella enterica subsp. enterica serovar Dessau] | diamond | 102 | 47.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Salmonella | Salmonella enterica | ||
| 28827784 | 28827784 | PRJNA1145276_P_NODE_14248_length_268_cov_1.020513_g14191_i0 | PRJNA1145276 | 14248 | 268 | 1.020513 | 2.73497484 | root | 1 | Root_unresolved | Root_unresolved | 46.6 | 5.87e-4 | NR | NBZ12677.1 | 573 | g14191 | i0 | 50 | 1.08582089552239 | 46 | 23 | 51.5 | 0 | 139 | 2 | 17 | 62 | NBZ12677.1 hypothetical protein [Klebsiella pneumoniae] | diamond | 291 | 46.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae | ||
| 28859421 | 28859421 | PRJNA1145276_P_NODE_3808_length_501_cov_1.221963_g3751_i0 | PRJNA1145276 | 3808 | 501 | 1.221963 | 6.12203463 | Escherichia | 561 | Bacteria | Bacteria | 77.4 | 6.41e-15 | NR | WP_187640792.1 | 562 | g3751 | i0 | 52.5 | 20.1137724550898 | 59 | 28 | 35.3 | 0 | 24 | 200 | 59 | 117 | WP_187640792.1 phage tail protein, partial [Escherichia coli] | diamond | 10077 | 77.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 28890936 | 28890936 | PRJNA1145276_P_NODE_8468_length_349_cov_1.394928_g8411_i0 | PRJNA1145276 | 8468 | 349 | 1.394928 | 4.86829872 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 75.5 | 1.59e-13 | NR | HAW0597555.1 | 562 | g8411 | i0 | 77.8 | 3.48137535816619 | 45 | 10 | 38.7 | 0 | 69 | 203 | 21 | 65 | HAW0597555.1 serine/threonine protein phosphatase [Escherichia coli] | diamond | 1215 | 75.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 29028773 | 29028773 | PRJNA1145276_P_NODE_10928_length_308_cov_1.625532_g10871_i0 | PRJNA1145276 | 10928 | 308 | 1.625532 | 5.00663856 | Escherichia coli | 562 | Bacteria | Bacteria | 70.1 | 1.9e-11 | NR | SQM55563.1 | 562 | g10871 | i0 | 43.8 | 0.711038961038961 | 73 | 41 | 71.1 | 0 | 270 | 52 | 387 | 459 | SQM55563.1 phage portal protein (minor capsid protein) [Escherichia coli] | diamond | 219 | 70.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 29123493 | 29123493 | PRJNA1145276_P_NODE_16409_length_249_cov_1.125000_g16352_i0 | PRJNA1145276 | 16409 | 249 | 1.125 | 2.80125 | Escherichia coli | 562 | Bacteria | Bacteria | 87.4 | 3.05e-19 | NR | KZO73721.1 | 562 | g16352 | i0 | 50.6 | 4.75903614457831 | 79 | 39 | 95.2 | 0 | 248 | 12 | 82 | 160 | KZO73721.1 hypothetical protein TH56_22795 [Escherichia coli] | diamond | 1185 | 87.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 29143995 | 29143995 | PRJNA1145276_P_NODE_9549_length_330_cov_1.198444_g9492_i0 | PRJNA1145276 | 9549 | 330 | 1.198444 | 3.9548652 | Gammaproteobacteria | 1236 | Bacteria | Bacteria | 89 | 4.41e-20 | NR | WP_248081466.1 | 550 | g9492 | i0 | 51.2 | 32.8636363636364 | 82 | 40 | 74.5 | 0 | 327 | 82 | 47 | 128 | WP_248081466.1 terminase small subunit, partial [Enterobacter cloacae] | diamond | 10845 | 89.4 | 0.995525727069351 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Enterobacter | Enterobacter cloacae | ||
| 29344312 | 29344312 | PRJNA1145276_P_NODE_3969_length_491_cov_1.387560_g3912_i0 | PRJNA1145276 | 3969 | 491 | 1.38756 | 6.8129196 | Escherichia coli | 562 | Bacteria | Bacteria | 120 | 1.09e-29 | NR | GDB63797.1 | 562 | g3912 | i0 | 52.7 | 1.36863543788187 | 112 | 53 | 68.4 | 0 | 340 | 5 | 1 | 112 | GDB63797.1 hypothetical protein HmCmsJML188_04337 [Escherichia coli] | diamond | 672 | 120 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 29565187 | 29565187 | PRJNA1145276_P_NODE_16370_length_249_cov_1.312500_g16313_i0 | PRJNA1145276 | 16370 | 249 | 1.3125 | 3.268125 | Escherichia coli | 562 | Bacteria | Bacteria | 117 | 8.089999999999999e-32 | NR | VCY73363.1 | 562 | g16313 | i0 | 68.3 | 9.87951807228916 | 82 | 26 | 98.8 | 0 | 2 | 247 | 7 | 88 | VCY73363.1 hypothetical protein BANRA_03998 [Escherichia coli] | diamond | 2460 | 117 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 29596452 | 29596452 | PRJNA1145276_P_NODE_13630_length_274_cov_2.169154_g13573_i0 | PRJNA1145276 | 13630 | 274 | 2.169154 | 5.94348196 | Escherichia coli OK1357 | 670905 | Bacteria | Bacteria | 86.3 | 8.21e-20 | NR | EFZ71056.1 | 670905 | g13573 | i0 | 65 | 0.656934306569343 | 60 | 21 | 65.7 | 0 | 267 | 88 | 12 | 71 | EFZ71056.1 hypothetical protein ECOK1357_1059 [Escherichia coli OK1357] | diamond | 180 | 86.3 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 29743360 | 29743360 | PRJNA1145276_P_NODE_6450_length_394_cov_1.258567_g6393_i0 | PRJNA1145276 | 6450 | 394 | 1.258567 | 4.95875398 | Bacteria | 2 | Bacteria | Bacteria | 127 | 1.58e-34 | NR | HGU0922076.1 | 562 | g6393 | i0 | 61.8 | 5.98477157360406 | 131 | 50 | 99.7 | 0 | 2 | 394 | 9 | 139 | HGU0922076.1 protein rexA [Escherichia coli] | diamond | 2358 | 127 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 29754527 | 29754527 | PRJNA1145276_P_NODE_3991_length_490_cov_0.803357_g3934_i0 | PRJNA1145276 | 3991 | 490 | 0.803357 | 3.9364493 | Enterobacter hormaechei | 158836 | Bacteria | Bacteria | 103 | 9.42e-26 | NR | WP_251276324.1 | 158836 | g3934 | i0 | 69 | 0.43469387755102 | 71 | 22 | 43.5 | 0 | 476 | 264 | 1 | 71 | WP_251276324.1 hypothetical protein, partial [Enterobacter hormaechei] | diamond | 213 | 103 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Enterobacter | Enterobacter hormaechei | ||
| 29912767 | 29912767 | PRJNA1145276_P_NODE_9771_length_326_cov_1.470356_g9714_i0 | PRJNA1145276 | 9771 | 326 | 1.470356 | 4.79336056 | Pseudomonas capeferrum | 1495066 | Bacteria | Bacteria | 56.2 | 1.21e-6 | NR | WP_339471085.1 | 1495066 | g9714 | i0 | 73.2 | 1.1319018404908 | 41 | 11 | 37.7 | 0 | 203 | 325 | 132 | 172 | WP_339471085.1 reverse transcriptase family protein, partial [Pseudomonas capeferrum] | diamond | 369 | 56.6 | 0.992932862190813 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas capeferrum | ||
| 29975773 | 29975773 | PRJNA1145276_P_NODE_13031_length_281_cov_1.591346_g12974_i0 | PRJNA1145276 | 13031 | 281 | 1.591346 | 4.47168226 | Escherichia coli | 562 | Bacteria | Bacteria | 54.7 | 3.04e-7 | NR | WP_214703757.1 | 562 | g12974 | i0 | 42.6 | 0.725978647686833 | 68 | 39 | 72.6 | 0 | 46 | 249 | 3 | 70 | WP_214703757.1 hypothetical protein, partial [Escherichia coli] | diamond | 204 | 54.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 30007539 | 30007539 | PRJNA1145276_P_NODE_7651_length_366_cov_1.245734_g7594_i0 | PRJNA1145276 | 7651 | 366 | 1.245734 | 4.55938644 | Escherichia coli FDA5 | 562 | Bacteria | Bacteria | 52.8 | 1.24e-5 | NR | EKH24674.1 | 1005470 | g7594 | i0 | 45.8 | 0.483606557377049 | 59 | 32 | 48.4 | 0 | 333 | 157 | 1 | 59 | EKH24674.1 hypothetical protein ECFDA504_3205, partial [Escherichia coli FDA504] | diamond | 177 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 30038921 | 30038921 | PRJNA1145276_P_NODE_3971_length_491_cov_1.330144_g3914_i0 | PRJNA1145276 | 3971 | 491 | 1.330144 | 6.53100704 | Escherichia coli | 562 | Bacteria | Bacteria | 83.2 | 2.64e-17 | NR | WP_119918988.1 | 562 | g3914 | i0 | 60.3 | 3.46435845213849 | 63 | 25 | 38.5 | 0 | 468 | 280 | 19 | 81 | WP_119918988.1 antitermination protein N [Escherichia coli] | diamond | 1701 | 83.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 30070447 | 30070447 | PRJNA1145276_P_NODE_14472_length_265_cov_1.203125_g14415_i0 | PRJNA1145276 | 14472 | 265 | 1.203125 | 3.18828125 | Escherichia coli | 562 | Bacteria | Bacteria | 70.5 | 6.32e-13 | NR | WP_143403160.1 | 562 | g14415 | i0 | 49.3 | 167.62641509434 | 67 | 34 | 75.8 | 0 | 253 | 53 | 57 | 123 | WP_143403160.1 NlpC/P60 family protein, partial [Escherichia coli] | diamond | 44421 | 70.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 30196763 | 30196763 | PRJNA1145276_P_NODE_11252_length_304_cov_0.822511_g11195_i0 | PRJNA1145276 | 11252 | 304 | 0.822511 | 2.50043344 | Stutzerimonas stutzeri | 316 | Bacteria | Bacteria | 45.4 | 0.00113 | NR | WP_219853451.1 | 316 | g11195 | i0 | 53.7 | 0.404605263157895 | 41 | 19 | 40.5 | 0 | 182 | 60 | 36 | 76 | WP_219853451.1 hypothetical protein, partial [Stutzerimonas stutzeri] | diamond | 123 | 45.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Stutzerimonas | Stutzerimonas stutzeri | ||
| 30228452 | 30228452 | PRJNA1145276_P_NODE_3972_length_491_cov_1.289474_g3915_i0 | PRJNA1145276 | 3972 | 491 | 1.289474 | 6.33131734 | Escherichia coli | 562 | Bacteria | Bacteria | 60.1 | 5.34e-9 | NR | WP_197569370.1 | 562 | g3915 | i0 | 73.2 | 0.25050916496945 | 41 | 11 | 25.1 | 0 | 6 | 128 | 7 | 47 | WP_197569370.1 phage holin family protein, partial [Escherichia coli] | diamond | 123 | 60.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 30355426 | 30355426 | PRJNA1145276_P_NODE_14432_length_265_cov_1.713542_g14375_i0 | PRJNA1145276 | 14432 | 265 | 1.713542 | 4.5408863 | Escherichia coli | 562 | Bacteria | Bacteria | 83.2 | 1.01e-17 | NR | WP_024179172.1 | 562 | g14375 | i0 | 50.7 | 2.43396226415094 | 73 | 36 | 82.6 | 0 | 224 | 6 | 52 | 124 | WP_024179172.1 phage minor tail protein L, partial [Escherichia coli] | diamond | 645 | 83.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 30355429 | 30355429 | PRJNA1145276_P_NODE_19252_length_242_cov_0.911243_g19195_i0 | PRJNA1145276 | 19252 | 242 | 0.911243 | 2.20520806 | Escherichia coli | 562 | Bacteria | Bacteria | 89 | 9.8e-20 | NR | SQP56330.1 | 562 | g19195 | i0 | 52.6 | 1.8099173553719 | 76 | 36 | 94.2 | 0 | 242 | 15 | 93 | 168 | SQP56330.1 Superoxide dismutase [Escherichia coli] | diamond | 438 | 89 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 30375853 | 30375853 | PRJNA1145276_P_NODE_16772_length_248_cov_0.880000_g16715_i0 | PRJNA1145276 | 16772 | 248 | 0.88 | 2.1824 | root | 1 | Root_unresolved | Root_unresolved | 59.7 | 6.83e-10 | NR | WP_249821447.1 | 562 | g16715 | i0 | 52.1 | 16.633064516129 | 48 | 23 | 58.1 | 0 | 165 | 22 | 2 | 49 | WP_249821447.1 excisionase, partial [Escherichia coli] | diamond | 4125 | 59.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 30564658 | 30564658 | PRJNA1145276_P_NODE_1833_length_705_cov_1.569620_g1780_i0 | PRJNA1145276 | 1833 | 705 | 1.56962 | 11.065821 | root | 1 | Root_unresolved | Root_unresolved | 105 | 5.53e-25 | NR | WP_159182371.1 | 562 | g1780 | i0 | 56.7 | 5.08510638297872 | 97 | 42 | 41.3 | 0 | 302 | 12 | 3 | 99 | WP_159182371.1 glycoside hydrolase family 104 protein, partial [Escherichia coli] | diamond | 3585 | 105 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 30607538 | 30607538 | PRJNA1145276_P_NODE_4613_length_458_cov_1.200000_g4556_i0 | PRJNA1145276 | 4613 | 458 | 1.2 | 5.496 | Escherichia coli | 562 | Bacteria | Bacteria | 63.9 | 8.65e-10 | NR | EEW1880186.1 | 562 | g4556 | i0 | 33.3 | 0.707423580786026 | 108 | 72 | 70.7 | 0 | 73 | 396 | 1 | 108 | EEW1880186.1 hypothetical protein [Escherichia coli] | diamond | 324 | 63.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 30734028 | 30734028 | PRJNA1145276_P_NODE_18294_length_244_cov_0.959064_g18237_i0 | PRJNA1145276 | 18294 | 244 | 0.959064 | 2.34011616 | Enterobacter hormaechei | 158836 | Bacteria | Bacteria | 74.7 | 1.3e-15 | NR | WP_251276324.1 | 158836 | g18237 | i0 | 58.1 | 0.762295081967213 | 62 | 26 | 76.2 | 0 | 2 | 187 | 10 | 71 | WP_251276324.1 hypothetical protein, partial [Enterobacter hormaechei] | diamond | 186 | 74.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Enterobacter | Enterobacter hormaechei | ||
| 30828810 | 30828810 | PRJNA1145276_P_NODE_11754_length_297_cov_0.982143_g11697_i0 | PRJNA1145276 | 11754 | 297 | 0.982143 | 2.91696471 | Escherichia coli | 562 | Bacteria | Bacteria | 56.2 | 9.21e-8 | NR | MCA7454802.1 | 562 | g11697 | i0 | 51 | 7.42424242424242 | 49 | 24 | 49.5 | 0 | 160 | 14 | 1 | 49 | MCA7454802.1 YqaJ viral recombinase family protein [Escherichia coli] | diamond | 2205 | 56.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 30923869 | 30923869 | PRJNA1145276_P_NODE_15014_length_258_cov_1.664865_g14957_i0 | PRJNA1145276 | 15014 | 258 | 1.664865 | 4.2953517 | Escherichia coli | 562 | Bacteria | Bacteria | 99.4 | 5.45e-22 | NR | WP_404855513.1 | 562 | g14957 | i0 | 65.7 | 0.779069767441861 | 67 | 23 | 77.9 | 0 | 203 | 3 | 555 | 621 | WP_404855513.1 terminase gpA endonuclease subunit [Escherichia coli] | diamond | 201 | 99.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 31302848 | 31302848 | PRJNA1145276_P_NODE_4575_length_459_cov_1.466321_g4518_i0 | PRJNA1145276 | 4575 | 459 | 1.466321 | 6.73041339 | Pseudocitrobacter faecalis | 1398493 | Bacteria | Bacteria | 92.4 | 5.8e-20 | NR | WP_407732263.1 | 1398493 | g4518 | i0 | 39.1 | 3.34640522875817 | 128 | 78 | 83.7 | 0 | 456 | 73 | 8 | 135 | WP_407732263.1 antitermination protein [Pseudocitrobacter faecalis] | diamond | 1536 | 92.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Pseudocitrobacter | Pseudocitrobacter faecalis | ||
| 31777275 | 31777275 | PRJNA1145276_P_NODE_17057_length_247_cov_1.764368_g17000_i0 | PRJNA1145276 | 17057 | 247 | 1.764368 | 4.35798896 | Shigella sonnei | 624 | Bacteria | Bacteria | 75.9 | 8.88e-16 | NR | EFY1197791.1 | 624 | g17000 | i0 | 61.7 | 3.64372469635628 | 60 | 23 | 72.9 | 0 | 244 | 65 | 36 | 95 | EFY1197791.1 hypothetical protein [Shigella sonnei] | diamond | 900 | 75.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Shigella | Shigella sonnei | ||
| 31955911 | 31955911 | PRJNA1145276_P_NODE_12037_length_293_cov_1.050000_g11980_i0 | PRJNA1145276 | 12037 | 293 | 1.05 | 3.0765 | Escherichia | 561 | Bacteria | Bacteria | 48.9 | 2.74e-5 | NR | WP_213060497.1 | 562 | g11980 | i0 | 47.7 | 0.901023890784983 | 44 | 23 | 45.1 | 0 | 151 | 20 | 20 | 63 | WP_213060497.1 hypothetical protein, partial [Escherichia coli] | diamond | 264 | 48.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 32177676 | 32177676 | PRJNA1145276_P_NODE_2718_length_589_cov_1.864341_g2662_i0 | PRJNA1145276 | 2718 | 589 | 1.864341 | 10.98096849 | Bacteria | 2 | Bacteria | Bacteria | 107 | 4.06e-25 | NR | WP_250271761.1 | 562 | g2662 | i0 | 49.5 | 339.74363327674 | 103 | 52 | 52.5 | 0 | 350 | 42 | 66 | 168 | WP_250271761.1 phage terminase large subunit family protein, partial [Escherichia coli] | diamond | 200109 | 107 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 32410200 | 32410200 | PRJNA1145276_P_NODE_15139_length_257_cov_1.255435_g15082_i0 | PRJNA1145276 | 15139 | 257 | 1.255435 | 3.22646795 | Pseudomonas aeruginosa | 287 | Bacteria | Bacteria | 53.9 | 1.81e-7 | NR | WP_335929172.1 | 287 | g15082 | i0 | 50 | 0.583657587548638 | 50 | 25 | 58.4 | 0 | 151 | 2 | 2 | 51 | WP_335929172.1 hypothetical protein, partial [Pseudomonas aeruginosa] | diamond | 150 | 53.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 32462413 | 32462413 | PRJNA1145276_P_NODE_9639_length_328_cov_1.811765_g9582_i0 | PRJNA1145276 | 9639 | 328 | 1.811765 | 5.9425892 | root | 1 | Root_unresolved | Root_unresolved | 77.8 | 2.74e-16 | NR | WP_345786791.1 | 470 | g9582 | i0 | 69 | 7.42682926829268 | 58 | 18 | 53 | 0 | 92 | 265 | 14 | 71 | WP_345786791.1 super-infection exclusion protein B, partial [Acinetobacter baumannii] | diamond | 2436 | 77.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter baumannii | ||
| 32662564 | 32662564 | PRJNA1145276_P_NODE_15120_length_257_cov_1.271739_g15063_i0 | PRJNA1145276 | 15120 | 257 | 1.271739 | 3.26836923 | Escherichia sp. MOD1-EC2449 | 2093859 | Bacteria | Bacteria | 61.6 | 6.92e-10 | NR | WP_105268838.1 | 2093859 | g15063 | i0 | 35.6 | 0.852140077821012 | 73 | 47 | 85.2 | 0 | 253 | 35 | 45 | 117 | WP_105268838.1 phage tail assembly protein T [Escherichia sp. MOD1-EC2449] | diamond | 219 | 61.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia sp. MOD1-EC2449 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;