RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

21 rows where analysis = "diamond", bioproject = "PRJNA1145276" and tax_phylum = "Kitrinoviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 21 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1145276 · 21 ✖

analysis 1

  • diamond · 21 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6666199 6666199 PRJNA1145276_P_NODE_14506_length_264_cov_2.780105_g14449_i0 PRJNA1145276 14506 264 2.780105 7.3394772 Jasmine virus C 1853762 Viruses Viruses 177 1.79e-49   NR ULO04618.1 1853762 g14449 i0 98.9 2.96590909090909 87 1 98.9 0 262 2 1754 1840 ULO04618.1 polyprotein [Jasmine virus C] diamond 783 177 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus jasmini
6666218 6666218 PRJNA1145276_P_NODE_15226_length_256_cov_1.262295_g15169_i0 PRJNA1145276 15226 256 1.262295 3.2314752 Jasmine virus C 1853762 Viruses Viruses 180 2.55e-50   NR ULO04618.1 1853762 g15169 i0 97.6 2.98828125 85 2 99.6 0 2 256 1822 1906 ULO04618.1 polyprotein [Jasmine virus C] diamond 765 180 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus jasmini
10491943 10491943 PRJNA1145276_P_NODE_15349_length_254_cov_2.093923_g15292_i0 PRJNA1145276 15349 254 2.093923 5.31856442 Jasmine virus C 1853762 Viruses Viruses 167 5.03e-46   NR ULO04618.1 1853762 g15292 i0 96.4 2.94094488188976 83 3 98 0 252 4 1881 1963 ULO04618.1 polyprotein [Jasmine virus C] diamond 747 167 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus jasmini
14317410 14317410 PRJNA1145276_P_NODE_5612_length_420_cov_1.325648_g5555_i0 PRJNA1145276 5612 420 1.325648 5.5677216 Jasmine virus C 1853762 Viruses Viruses 275 1.89e-82   NR ULO04618.1 1853762 g5555 i0 96.4 3 140 5 100 0 1 420 1588 1727 ULO04618.1 polyprotein [Jasmine virus C] diamond 1260 275 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus jasmini
26627372 26627372 PRJNA1145276_P_NODE_1001_length_929_cov_1.369159_g959_i0 PRJNA1145276 1001 929 1.369159 12.71948711 Jasmine virus C 1853762 Viruses Viruses 506 9.69e-162   NR ULO04618.1 1853762 g959 i0 79.9 0.96232508073197 298 60 96.2 0 927 34 533 830 ULO04618.1 polyprotein [Jasmine virus C] diamond 894 506 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus jasmini
26721923 26721923 PRJNA1145276_P_NODE_3141_length_548_cov_2.484211_g3084_i0 PRJNA1145276 3141 548 2.484211 13.61347628 Jasmine virus C 1853762 Viruses Viruses 187 3.0799999999999997e-56   NR ULO04619.1 1853762 g3084 i0 89.1 0.552919708029197 101 11 55.3 0 544 242 130 230 ULO04619.1 triple gene block 1 [Jasmine virus C] diamond 303 187 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus jasmini
27481350 27481350 PRJNA1145276_P_NODE_3963_length_491_cov_2.258373_g3906_i0 PRJNA1145276 3963 491 2.258373 11.08861143 Jasmine virus C 1853762 Viruses Viruses 184 5.18e-57   NR ULO04620.1 1853762 g3906 i0 84.6 0.635437881873727 104 16 63.5 0 314 3 1 104 ULO04620.1 triple gene block protein 2 [Jasmine virus C] diamond 312 184 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus jasmini
27734258 27734258 PRJNA1145276_P_NODE_13284_length_278_cov_1.663415_g13227_i0 PRJNA1145276 13284 278 1.663415 4.6242937 Jasmine virus C 1853762 Viruses Viruses 188 5.07e-53   NR ULO04618.1 1853762 g13227 i0 97.8 2.97841726618705 92 2 99.3 0 2 277 226 317 ULO04618.1 polyprotein [Jasmine virus C] diamond 828 188 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus jasmini
27828705 27828705 PRJNA1145276_P_NODE_6444_length_394_cov_1.482866_g6387_i0 PRJNA1145276 6444 394 1.482866 5.84249204 Jasmine virus C 1853762 Viruses Viruses 202 2.66e-57   NR ULO04618.1 1853762 g6387 i0 71 0.99746192893401 131 38 99.7 0 393 1 569 699 ULO04618.1 polyprotein [Jasmine virus C] diamond 393 202 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus jasmini
27986556 27986556 PRJNA1145276_P_NODE_19185_length_242_cov_0.911243_g19128_i0 PRJNA1145276 19185 242 0.911243 2.20520806 Jasmine virus C 1853762 Viruses Viruses 137 2.62e-35   NR ULO04618.1 1853762 g19128 i0 84.4 0.954545454545455 77 12 95.5 0 5 235 477 553 ULO04618.1 polyprotein [Jasmine virus C] diamond 231 137 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus jasmini
29028774 29028774 PRJNA1145276_P_NODE_2368_length_627_cov_2.120939_g2312_i0 PRJNA1145276 2368 627 2.120939 13.29828753 Jasmine virus C 1853762 Viruses Viruses 352 2.59e-108   NR ULO04618.1 1853762 g2312 i0 91.7 0.861244019138756 180 15 86.1 0 3 542 1283 1462 ULO04618.1 polyprotein [Jasmine virus C] diamond 540 352 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus jasmini
29470205 29470205 PRJNA1145276_P_NODE_11730_length_297_cov_1.075893_g11673_i0 PRJNA1145276 11730 297 1.075893 3.19540221 Jasmine virus C 1853762 Viruses Viruses 204 1.09e-58   NR YP_009275350.1 1853762 g11673 i0 98 3 99 2 100 0 1 297 1718 1816 YP_009275350.1 replicase [Jasmine virus C] diamond 891 204 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus jasmini
30007538 30007538 PRJNA1145276_P_NODE_1611_length_752_cov_1.397644_g1559_i0 PRJNA1145276 1611 752 1.397644 10.51028288 Jasmine virus C 1853762 Viruses Viruses 491 2.989999999999999e-157   NR ULO04618.1 1853762 g1559 i0 92.8 0.993351063829787 249 18 99.3 0 3 749 1141 1389 ULO04618.1 polyprotein [Jasmine virus C] diamond 747 491 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus jasmini
30196764 30196764 PRJNA1145276_P_NODE_15432_length_254_cov_1.005525_g15375_i0 PRJNA1145276 15432 254 1.005525 2.5540335 Jasmine virus C 1853762 Viruses Viruses 149 1.1e-39   NR ULO04618.1 1853762 g15375 i0 81 0.992125984251969 84 16 99.2 0 1 252 787 870 ULO04618.1 polyprotein [Jasmine virus C] diamond 252 149 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus jasmini
30670771 30670771 PRJNA1145276_P_NODE_6713_length_387_cov_1.796178_g6656_i0 PRJNA1145276 6713 387 1.796178 6.95120886 Jasmine virus C 1853762 Viruses Viruses 208 2.24e-59   NR ULO04618.1 1853762 g6656 i0 75.8 0.992248062015504 128 31 99.2 0 386 3 825 952 ULO04618.1 polyprotein [Jasmine virus C] diamond 384 208 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus jasmini
31050322 31050322 PRJNA1145276_P_NODE_10315_length_317_cov_1.795082_g10258_i0 PRJNA1145276 10315 317 1.795082 5.69040994 Jasmine virus C 1853762 Viruses Viruses 185 1.05e-51   NR ULO04618.1 1853762 g10258 i0 82.9 0.993690851735016 105 18 99.4 0 3 317 392 496 ULO04618.1 polyprotein [Jasmine virus C] diamond 315 185 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus jasmini
31366324 31366324 PRJNA1145276_P_NODE_3096_length_552_cov_2.294363_g3039_i0 PRJNA1145276 3096 552 2.294363 12.66488376 Jasmine virus C 1853762 Viruses Viruses 332 1.3199999999999995e-101   NR ULO04618.1 1853762 g3039 i0 89.1 0.994565217391304 183 20 99.5 0 550 2 1029 1211 ULO04618.1 polyprotein [Jasmine virus C] diamond 549 332 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus jasmini
31619130 31619130 PRJNA1145276_P_NODE_10536_length_314_cov_1.278008_g10479_i0 PRJNA1145276 10536 314 1.278008 4.01294512 Jasmine virus C 1853762 Viruses Viruses 195 2.3099999999999997e-55   NR UXX34115.1 1853762 g10479 i0 94.2 2.98089171974522 104 6 99.4 0 313 2 315 418 UXX34115.1 replicase [Jasmine virus C] diamond 936 195 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus jasmini
31745585 31745585 PRJNA1145276_P_NODE_15997_length_250_cov_1.344633_g15940_i0 PRJNA1145276 15997 250 1.344633 3.3615825 Jasmine virus C 1853762 Viruses Viruses 160 1.7599999999999999e-43   NR ULO04618.1 1853762 g15940 i0 95.2 2.988 83 4 99.6 0 1 249 1565 1647 ULO04618.1 polyprotein [Jasmine virus C] diamond 747 160 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus jasmini
31777276 31777276 PRJNA1145276_P_NODE_18037_length_245_cov_0.895349_g17980_i0 PRJNA1145276 18037 245 0.895349 2.19360505 Jasmine virus C 1853762 Viruses Viruses 147 6.23e-39   NR UXX34115.1 1853762 g17980 i0 91.3 2.93877551020408 80 7 98 0 245 6 351 430 UXX34115.1 replicase [Jasmine virus C] diamond 720 147 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus jasmini
31998782 31998782 PRJNA1145276_P_NODE_398_length_1396_cov_1.554800_g375_i0 PRJNA1145276 398 1396 1.5548 21.705008 Jasmine virus C 1853762 Viruses Viruses 778 7.779999999999999e-262   NR ULO04618.1 1853762 g375 i0 80 0.999283667621776 465 93 99.9 0 1 1395 548 1012 ULO04618.1 polyprotein [Jasmine virus C] diamond 1395 778 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus jasmini

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;