RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1145276" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1145276 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27533414 27533414 PRJNA1145276_P_NODE_18463_length_244_cov_0.900585_g18406_i0 PRJNA1145276 18463 244 0.900585 2.1974274 Hypocreales 5125 Fungi Fungi 113 5.539999999999999e-28   NR KAH7327993.1 80388 g18406 i0 67.6 3.35655737704918 68 22 83.6 0 221 18 193 260 KAH7327993.1 hypothetical protein B0I35DRAFT_6061 [Stachybotrys elegans] diamond 819 114 0.991228070175439 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Stachybotryaceae Stachybotrys Stachybotrys elegans
30228451 30228451 PRJNA1145276_P_NODE_18872_length_243_cov_0.905882_g18815_i0 PRJNA1145276 18872 243 0.905882 2.20129326 Aspergillus ruber CBS 13568 396024 Fungi Fungi 156 1.0299999999999998e-43   NR XP_040640303.1 1388766 g18815 i0 88.9 1 81 9 100 0 1 243 93 173 XP_040640303.1 cofactor for methionyl and glutamyl-tRNA synthetase [Aspergillus ruber CBS 135680] diamond 243 156 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus ruber

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;