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contig_metadata

22 rows where analysis = "diamond", bioproject = "PRJNA1144090" and tax_phylum = "Tubulinea"

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tax_superkingdom 1

tax_phylum 1

  • Tubulinea · 22 ✖

tax_clade 1

bioproject 1

  • PRJNA1144090 · 22 ✖

analysis 1

  • diamond · 22 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1561928 1561928 PRJNA1144090_P_NODE_4222_length_1374_cov_5.331284_g3961_i0 PRJNA1144090 4222 1374 5.331284 73.25184216 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 455 1.5699999999999997e-155   NR AAY34140.1 5778 g3961 i0 64.8 4.22707423580786 369 125 79.7 3 1360 266 1 368 AAY34140.1 Nop58p, partial [Vermamoeba vermiformis] diamond 5808 455 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
1561962 1561962 PRJNA1144090_P_NODE_46002_length_377_cov_3.108553_g45467_i0 PRJNA1144090 46002 377 3.108553 11.71924481 Amoeba proteus 5775 Tubulinea other_Eukaryota 87 1.23e-17   NR BAF75060.1 5775 g45467 i0 38.9 0.89920424403183 113 46 89.9 1 37 375 5 94 BAF75060.1 aquaporin [Amoeba proteus] diamond 339 87 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
2838485 2838485 PRJNA1144090_P_NODE_75083_length_291_cov_2.756881_g74548_i0 PRJNA1144090 75083 291 2.756881 8.02252371 Amoeba proteus 5775 Tubulinea other_Eukaryota 115 4.24e-29   NR BAF75060.1 5775 g74548 i0 55.8 0.979381443298969 95 42 97.9 0 1 285 85 179 BAF75060.1 aquaporin [Amoeba proteus] diamond 285 115 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
5390049 5390049 PRJNA1144090_P_NODE_106605_length_246_cov_3.763006_g106070_i0 PRJNA1144090 106605 246 3.763006 9.25699476 Copromyxa protea 931554 Tubulinea other_Eukaryota 145 1.62e-39   NR BAN33737.1 931554 g106070 i0 90 0.975609756097561 80 8 97.6 0 6 245 384 463 BAN33737.1 elongation factor-like protein [Copromyxa protea] diamond 240 145 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
5390643 5390643 PRJNA1144090_P_NODE_55265_length_342_cov_1.698885_g54730_i0 PRJNA1144090 55265 342 1.698885 5.8101867 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 88.2 6.47e-20   NR AAX99356.1 5778 g54730 i0 46.4 0.736842105263158 84 45 73.7 0 321 70 4 87 AAX99356.1 guanine deaminase-like protein, partial [Vermamoeba vermiformis] diamond 252 88.2 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
9215507 9215507 PRJNA1144090_P_NODE_5468_length_1222_cov_32.539600_g5167_i0 PRJNA1144090 5468 1222 32.5396 397.633912 Amoeba proteus 5775 Tubulinea other_Eukaryota 630 5.099999999999998e-225   NR AAP88974.1 5775 g5167 i0 78.5 0.957446808510638 390 82 95.7 1 1221 52 1 388 AAP88974.1 S-adenosylmethionine synthetase 2 [Amoeba proteus] diamond 1170 630 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
11765835 11765835 PRJNA1144090_P_NODE_2990_length_1592_cov_101.592495_g2792_i0 PRJNA1144090 2990 1592 101.592495 1617.3525204 Copromyxa protea 931554 Tubulinea other_Eukaryota 771 1.7e-277   NR BAN33737.1 931554 g2792 i0 81.7 3.46356783919598 464 79 86.3 1 22 1395 1 464 BAN33737.1 elongation factor-like protein [Copromyxa protea] diamond 5514 771 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
15590109 15590109 PRJNA1144090_P_NODE_33_length_5632_cov_7.663249_g25_i0 PRJNA1144090 33 5632 7.663249 431.59418368 Amoeba proteus 5775 Tubulinea other_Eukaryota 609 1.1799999999999999e-179   NR AAD33718.1 5775 g25 i0 51.8 0.347301136363636 652 272 34 13 2 1918 295 917 AAD33718.1 myosin heavy chain [Amoeba proteus] diamond 1956 609 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
16335408 16335408 PRJNA1144090_P_NODE_16013_length_690_cov_3.298217_g15509_i0 PRJNA1144090 16013 690 3.298217 22.7576973 Amoeba proteus 5775 Tubulinea other_Eukaryota 287 2.52e-85   NR AAD33718.1 5775 g15509 i0 65.5 1.03478260869565 238 72 100 6 1 690 67 302 AAD33718.1 myosin heavy chain [Amoeba proteus] diamond 714 287 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
18139195 18139195 PRJNA1144090_P_NODE_53915_length_346_cov_4.402930_g53380_i0 PRJNA1144090 53915 346 4.40293 15.2341378 Nolandella sp. ATCC 5 1908693 Tubulinea other_Eukaryota 171 4.77e-50   NR ACA04827.1 498005 g53380 i0 71.1 7.82947976878613 114 33 98.8 0 3 344 92 205 ACA04827.1 beta-tubulin, partial [Nolandella sp. ATCC 50913] diamond 2709 171 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Nolandella Nolandella sp. ATCC 50913
24513073 24513073 PRJNA1144090_P_NODE_3000_length_1590_cov_113.974291_g2792_i1 PRJNA1144090 3000 1590 113.974291 1812.1912269 Copromyxa protea 931554 Tubulinea other_Eukaryota 771 1.64e-277   NR BAN33737.1 931554 g2792 i1 81.7 3.46792452830189 464 79 86.4 1 1571 198 1 464 BAN33737.1 elongation factor-like protein [Copromyxa protea] diamond 5514 771 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
26721816 26721816 PRJNA1144090_P_NODE_103721_length_248_cov_1.731429_g103186_i0 PRJNA1144090 103721 248 1.731429 4.29394392 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 110 7.67e-26   NR ACA13172.1 5778 g103186 i0 63.4 0.991935483870968 82 30 99.2 0 248 3 182 263 ACA13172.1 mismatch repair MutS-like protein, partial [Vermamoeba vermiformis] diamond 246 110 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
27418419 27418419 PRJNA1144090_P_NODE_71783_length_298_cov_2.195556_g71248_i0 PRJNA1144090 71783 298 2.195556 6.54275688 Amoeba proteus 5775 Tubulinea other_Eukaryota 123 4.369999999999999e-31   NR AAD37351.1 5775 g71248 i0 75.9 0.795302013422819 79 18 79.5 1 237 1 86 163 AAD37351.1 pepstatin-insensitive carboxyl proteinase 1, partial [Amoeba proteus] diamond 237 123 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
27481269 27481269 PRJNA1144090_P_NODE_26383_length_517_cov_3.128378_g25850_i0 PRJNA1144090 26383 517 3.128378 16.17371426 Copromyxa protea 931554 Tubulinea other_Eukaryota 207 5.8600000000000005e-64   NR AKA62191.1 931554 g25850 i0 61.2 0.986460348162476 170 63 97.5 2 1 504 84 252 AKA62191.1 putative rhodoquinone biosynthesis methyltransferase-like protein RQUA [Copromyxa protea] diamond 510 207 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
28901972 28901972 PRJNA1144090_P_NODE_95728_length_256_cov_1.573770_g95193_i0 PRJNA1144090 95728 256 1.57377 4.0288512 Amoeba proteus 5775 Tubulinea other_Eukaryota 83.2 2.58e-16   NR AKN09694.1 5775 g95193 i0 46.8 1.1015625 94 39 98.4 3 256 5 343 435 AKN09694.1 Gem1 [Amoeba proteus] diamond 282 83.2 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
28965470 28965470 PRJNA1144090_P_NODE_89968_length_264_cov_3.581152_g89433_i0 PRJNA1144090 89968 264 3.581152 9.45424128 Amoeba proteus 5775 Tubulinea other_Eukaryota 112 4.37e-28   NR BAF75060.1 5775 g89433 i0 69.7 0.863636363636364 76 23 86.4 0 3 230 209 284 BAF75060.1 aquaporin [Amoeba proteus] diamond 228 112 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
29344255 29344255 PRJNA1144090_P_NODE_47469_length_371_cov_1.550336_g46934_i0 PRJNA1144090 47469 371 1.550336 5.75174656 Amoeba proteus 5775 Tubulinea other_Eukaryota 146 1.35e-40   NR AKN09689.1 5775 g46934 i0 58.5 0.994609164420485 123 51 99.5 0 369 1 131 253 AKN09689.1 Tom20 [Amoeba proteus] diamond 369 146 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
29470198 29470198 PRJNA1144090_P_NODE_98070_length_252_cov_2.150838_g97535_i0 PRJNA1144090 98070 252 2.150838 5.42011176 Amoeba proteus 5775 Tubulinea other_Eukaryota 79 6.51e-15   NR AAD37351.1 5775 g97535 i0 78.4 1.5952380952381 51 10 60.7 1 252 100 161 210 AAD37351.1 pepstatin-insensitive carboxyl proteinase 1, partial [Amoeba proteus] diamond 402 79 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
29659461 29659461 PRJNA1144090_P_NODE_29290_length_487_cov_2.577295_g28756_i0 PRJNA1144090 29290 487 2.577295 12.55142665 Rhizamoeba sp. ATCC 5 2909502 Tubulinea other_Eukaryota 176 1.42e-47   NR AEH95280.1 497999 g28756 i0 54.9 6.87474332648871 162 73 99.8 0 487 2 448 609 AEH95280.1 RNA polymerase II largest subunit, partial [Rhizamoeba sp. ATCC 50933] diamond 3348 176 1 Eukaryota Amoebozoa   Tubulinea Elardia Leptomyxida Flabellulidae Rhizamoeba Rhizamoeba sp. ATCC 50933
30281051 30281051 PRJNA1144090_P_NODE_57972_length_333_cov_3.130769_g57437_i0 PRJNA1144090 57972 333 3.130769 10.42546077 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 158 1.3799999999999998e-47   NR AAX57202.1 5778 g57437 i0 69.1 9.90990990990991 110 33 99.1 1 2 331 18 126 AAX57202.1 vacuolar protein sorting protein 26, partial [Vermamoeba vermiformis] diamond 3300 158 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
31239478 31239478 PRJNA1144090_P_NODE_90335_length_264_cov_1.612565_g89800_i0 PRJNA1144090 90335 264 1.612565 4.2571716 Amoeba proteus 5775 Tubulinea other_Eukaryota 81.3 4.63e-16   NR AKN09693.1 5775 g89800 i0 47.4 0.886363636363636 78 41 88.6 0 240 7 50 127 AKN09693.1 metaxin [Amoeba proteus] diamond 234 81.3 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
31461159 31461159 PRJNA1144090_P_NODE_15776_length_696_cov_3.073836_g15280_i0 PRJNA1144090 15776 696 3.073836 21.39389856 Amoeba proteus 5775 Tubulinea other_Eukaryota 201 3.2e-60   NR AKN09689.1 5775 g15280 i0 46.7 0.969827586206897 225 106 96.6 3 1 672 69 280 AKN09689.1 Tom20 [Amoeba proteus] diamond 675 201 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;