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contig_metadata

27 rows where analysis = "diamond", bioproject = "PRJNA1144090" and tax_phylum = "Parabasalia"

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tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 27 ✖

tax_clade 1

bioproject 1

  • PRJNA1144090 · 27 ✖

analysis 1

  • diamond · 27 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1562106 1562106 PRJNA1144090_P_NODE_58182_length_333_cov_1.707692_g57647_i0 PRJNA1144090 58182 333 1.707692 5.68661436 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 119 6.18e-29   NR XP_068349970.1 1144522 g57647 i0 56.6 1.01801801801802 113 45 98.2 2 333 7 419 531 XP_068349970.1 Copine family protein [Tritrichomonas foetus] diamond 339 119 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
13041269 13041269 PRJNA1144090_P_NODE_66731_length_310_cov_1.603376_g66196_i0 PRJNA1144090 66731 310 1.603376 4.9704656 root 1 Root_unresolved Root_unresolved 101 2.5e-23   NR AMQ24252.1 929580 g66196 i0 63 3.04838709677419 81 30 78.4 0 249 7 11 91 AMQ24252.1 ornithine transcarbamylase [Lacusteria cypriaca] diamond 945 101 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Lacusteria Lacusteria cypriaca
27027800 27027800 PRJNA1144090_P_NODE_91422_length_262_cov_2.190476_g90887_i0 PRJNA1144090 91422 262 2.190476 5.73904712 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 47 8.98e-4   NR XP_001330357.1 412133 g90887 i0 36.8 1.30534351145038 57 36 65.3 0 183 13 75 131 XP_001330357.1 peptidyl-prolyl cis-trans isomerase protein [Trichomonas vaginalis G3] diamond 342 47 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
27228465 27228465 PRJNA1144090_P_NODE_61363_length_324_cov_1.266932_g60828_i0 PRJNA1144090 61363 324 1.266932 4.10485968 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 172 9.74e-48   NR XP_068358137.1 1144522 g60828 i0 74.1 1 108 28 100 0 324 1 88 195 XP_068358137.1 Alpha-galactosidase [Tritrichomonas foetus] diamond 324 172 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
27670864 27670864 PRJNA1144090_P_NODE_100484_length_250_cov_1.740113_g99949_i0 PRJNA1144090 100484 250 1.740113 4.3502825 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 106 1.88e-25   NR XP_068365731.1 1144522 g99949 i0 68.5 2.628 73 23 87.6 0 228 10 225 297 XP_068365731.1 Clan CD, family C14, metacaspase-like cysteine peptidase [Tritrichomonas foetus] diamond 657 106 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
27923285 27923285 PRJNA1144090_P_NODE_31785_length_466_cov_2.045802_g31250_i0 PRJNA1144090 31785 466 2.045802 9.53343732 Tritrichomonas musculus 1915356 Parabasalia other_Eukaryota 112 3.29e-28   NR KAK8834809.1 1915356 g31250 i0 47.5 0.759656652360515 118 60 76 2 4 357 13 128 KAK8834809.1 hypothetical protein M9Y10_024203 [Tritrichomonas musculus] diamond 354 112 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas musculus
28144529 28144529 PRJNA1144090_P_NODE_116465_length_241_cov_0.916667_g115930_i0 PRJNA1144090 116465 241 0.916667 2.20916747 Tritrichomonas musculus 1915356 Parabasalia other_Eukaryota 52.8 1.07e-5   NR KAK8834053.1 1915356 g115930 i0 53.2 1.1701244813278 47 22 58.5 0 238 98 154 200 KAK8834053.1 hypothetical protein M9Y10_036862 [Tritrichomonas musculus] diamond 282 52.8 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas musculus
28554961 28554961 PRJNA1144090_P_NODE_31567_length_468_cov_1.711392_g31032_i0 PRJNA1144090 31567 468 1.711392 8.00931456 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 52 1.96e-4   NR XP_068362246.1 1144522 g31032 i0 44.8 0.371794871794872 58 30 37.2 1 467 294 262 317 XP_068362246.1 Serine/threonine-protein phosphatase PP1 [Tritrichomonas foetus] diamond 174 52 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
28681305 28681305 PRJNA1144090_P_NODE_73907_length_294_cov_1.393665_g73372_i0 PRJNA1144090 73907 294 1.393665 4.0973751 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 147 8.59e-44   NR XP_068366196.1 1144522 g73372 i0 77.3 0.989795918367347 97 22 99 0 292 2 6 102 XP_068366196.1 ribosomal protein L31e [Tritrichomonas foetus] diamond 291 147 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
28901926 28901926 PRJNA1144090_P_NODE_52428_length_352_cov_1.584229_g51893_i0 PRJNA1144090 52428 352 1.584229 5.57648608 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 75.9 2.99e-13   NR XP_068366611.1 1144522 g51893 i0 37.4 0.980113636363636 115 71 98 1 7 351 297 410 XP_068366611.1 major facilitator superfamily transporter [Tritrichomonas foetus] diamond 345 75.9 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
28997137 28997137 PRJNA1144090_P_NODE_26428_length_517_cov_1.882883_g25895_i0 PRJNA1144090 26428 517 1.882883 9.73450511 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 93.6 2.61e-19   NR XP_068357799.1 1144522 g25895 i0 37.8 0.783365570599613 135 75 77.2 4 426 28 104 231 XP_068357799.1 Acyltransferase family protein [Tritrichomonas foetus] diamond 405 93.6 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
29028661 29028661 PRJNA1144090_P_NODE_104108_length_248_cov_0.880000_g103573_i0 PRJNA1144090 104108 248 0.88 2.1824 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 72.8 9.56e-13   NR XP_068352999.1 1144522 g103573 i0 46.8 0.955645161290323 79 41 94.4 1 12 245 209 287 XP_068352999.1 Ser/Thr protein phosphatase [Tritrichomonas foetus] diamond 237 72.8 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
29522555 29522555 PRJNA1144090_P_NODE_89050_length_266_cov_1.595855_g88515_i0 PRJNA1144090 89050 266 1.595855 4.2449743 root 1 Root_unresolved Root_unresolved 120 2.02e-30   NR XP_067771226.1 135588 g88515 i0 67.8 2.94360902255639 87 28 98.1 0 266 6 111 197 XP_067771226.1 DegT/DnrJ/EryC1/StrS aminotransferase family protein [Histomonas meleagridis] diamond 783 121 0.991735537190083 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
29627861 29627861 PRJNA1144090_P_NODE_50770_length_358_cov_1.617544_g50235_i0 PRJNA1144090 50770 358 1.617544 5.79080752 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 221 1.21e-65   NR XP_068358137.1 1144522 g50235 i0 83.6 1.94413407821229 116 19 97.2 0 358 11 471 586 XP_068358137.1 Alpha-galactosidase [Tritrichomonas foetus] diamond 696 221 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
29849389 29849389 PRJNA1144090_P_NODE_116671_length_241_cov_0.916667_g116136_i0 PRJNA1144090 116671 241 0.916667 2.20916747 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 116 7.789999999999999e-31   NR XP_068347946.1 1144522 g116136 i0 68.4 0.983402489626556 79 25 98.3 0 239 3 19 97 XP_068347946.1 uncharacterized protein TRFO_38993 [Tritrichomonas foetus] diamond 237 116 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
29944184 29944184 PRJNA1144090_P_NODE_100911_length_250_cov_0.870056_g100376_i0 PRJNA1144090 100911 250 0.870056 2.17514 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 138 1.19e-38   NR XP_068351301.1 1144522 g100376 i0 79.7 0.948 79 16 94.8 0 237 1 146 224 XP_068351301.1 Ubiquitin-conjugating enzyme family protein [Tritrichomonas foetus] diamond 237 138 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
30070341 30070341 PRJNA1144090_P_NODE_113032_length_243_cov_0.905882_g112497_i0 PRJNA1144090 113032 243 0.905882 2.20129326 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 99 6.44e-22   NR XP_068348962.1 1144522 g112497 i0 63 1 81 30 100 0 1 243 822 902 XP_068348962.1 Beige/BEACH domain containing protein [Tritrichomonas foetus] diamond 243 99 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
30133281 30133281 PRJNA1144090_P_NODE_115412_length_241_cov_1.833333_g114877_i0 PRJNA1144090 115412 241 1.833333 4.41833253 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 48.5 3.2e-4   NR XP_067777894.1 135588 g114877 i0 47.2 1.9792531120332 53 26 66 2 223 65 277 327 XP_067777894.1 STE family protein kinase [Histomonas meleagridis] diamond 477 48.5 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
30828793 30828793 PRJNA1144090_P_NODE_86094_length_271_cov_1.555556_g85559_i0 PRJNA1144090 86094 271 1.555556 4.21555676 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 156 1.38e-45   NR XP_068363307.1 1144522 g85559 i0 82.2 0.996309963099631 90 16 99.6 0 1 270 91 180 XP_068363307.1 hydrogenosomal membrane protein 31 precursor [Tritrichomonas foetus] diamond 270 156 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
31007353 31007353 PRJNA1144090_P_NODE_94234_length_258_cov_1.664865_g93699_i0 PRJNA1144090 94234 258 1.664865 4.2953517 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 63.2 8.5e-10   NR XP_067778584.1 135588 g93699 i0 53.6 2.61627906976744 56 25 65.1 1 84 251 28 82 XP_067778584.1 ras-related protein RABA2a [Histomonas meleagridis] diamond 675 63.2 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
31081659 31081659 PRJNA1144090_P_NODE_64955_length_314_cov_2.464730_g64420_i0 PRJNA1144090 64955 314 2.46473 7.7392522 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 65.5 8.51e-10   NR XP_068367495.1 1144522 g64420 i0 34.7 1.91082802547771 101 62 96.5 1 310 8 8 104 XP_068367495.1 AGC family protein kinase [Tritrichomonas foetus] diamond 600 65.5 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
31397793 31397793 PRJNA1144090_P_NODE_112976_length_243_cov_0.905882_g112441_i0 PRJNA1144090 112976 243 0.905882 2.20129326 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 115 2.67e-28   NR XP_068354352.1 1144522 g112441 i0 67.6 0.839506172839506 68 22 84 0 2 205 369 436 XP_068354352.1 Clan CD, family C14 [Tritrichomonas foetus] diamond 204 115 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
31682154 31682154 PRJNA1144090_P_NODE_61237_length_324_cov_2.079681_g60702_i0 PRJNA1144090 61237 324 2.079681 6.73816644 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 200 3.48e-58   NR XP_068358137.1 1144522 g60702 i0 85 0.990740740740741 107 16 99.1 0 2 322 257 363 XP_068358137.1 Alpha-galactosidase [Tritrichomonas foetus] diamond 321 200 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
32061936 32061936 PRJNA1144090_P_NODE_51718_length_354_cov_3.188612_g51183_i0 PRJNA1144090 51718 354 3.188612 11.28768648 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 206 5.019999999999999e-60   NR XP_068358137.1 1144522 g51183 i0 78.6 0.991525423728814 117 25 99.2 0 353 3 230 346 XP_068358137.1 Alpha-galactosidase [Tritrichomonas foetus] diamond 351 206 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
32188695 32188695 PRJNA1144090_P_NODE_86758_length_270_cov_1.563452_g86223_i0 PRJNA1144090 86758 270 1.563452 4.2213204 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 154 1.76e-42   NR XP_068366445.1 1144522 g86223 i0 88.8 1.97777777777778 89 10 98.9 0 269 3 83 171 XP_068366445.1 enolase family protein [Tritrichomonas foetus] diamond 534 154 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
32788524 32788524 PRJNA1144090_P_NODE_69880_length_302_cov_3.908297_g69345_i0 PRJNA1144090 69880 302 3.908297 11.80305694 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 92 3.69e-19   NR XP_001302110.1 412133 g69345 i0 42.4 1.95695364238411 99 51 98.3 2 298 2 336 428 XP_001302110.1 protein kinase protein [Trichomonas vaginalis G3] diamond 591 92 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
32882972 32882972 PRJNA1144090_P_NODE_75860_length_290_cov_1.419355_g75325_i0 PRJNA1144090 75860 290 1.419355 4.1161295 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 144 2.79e-39   NR XP_068359089.1 1144522 g75325 i0 81 0.817241379310345 79 15 81.7 0 288 52 328 406 XP_068359089.1 galactokinase family protein [Tritrichomonas foetus] diamond 237 144 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;