RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA1144090" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA1144090 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26806267 26806267 PRJNA1144090_P_NODE_39701_length_409_cov_16.708333_g39166_i0 PRJNA1144090 39701 409 16.708333 68.33708197 Bacteria 2 Bacteria Bacteria 104 4.5e-26   NR MDB5169429.1 2026720 g39166 i0 55.4 6.62347188264059 83 37 60.9 0 291 43 5 87 MDB5169429.1 rbpA [Candidatus Saccharibacteria bacterium] diamond 2709 105 0.990476190476191 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
27291800 27291800 PRJNA1144090_P_NODE_44423_length_385_cov_1.769231_g43888_i0 PRJNA1144090 44423 385 1.769231 6.81153935 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 64.7 1.02e-9   NR HUD82748.1 2973664 g43888 i0 36.2 1.01298701298701 130 65 99.7 2 2 385 32 145 HUD82748.1 WD40 repeat domain-containing protein [Candidatus Saccharimonadales bacterium] diamond 390 64.7 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
28775778 28775778 PRJNA1144090_P_NODE_72147_length_297_cov_3.897321_g71612_i0 PRJNA1144090 72147 297 3.897321 11.57504337 Candidatus Nanosynbacter sp. HMT-352 2899133 Bacteria Bacteria 62.8 6.62e-9   NR WP_243777738.1 2899133 g71612 i0 43.3 0.909090909090909 90 46 88.9 3 270 7 340 426 WP_243777738.1 RCC1 domain-containing protein [Candidatus Nanosynbacter sp. HMT-352] diamond 270 62.8 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Nanosynbacterales Candidatus Nanosynbacteraceae Candidatus Nanosynbacter Candidatus Nanosynbacter sp. HMT-352
29375731 29375731 PRJNA1144090_P_NODE_71369_length_299_cov_2.070796_g70834_i0 PRJNA1144090 71369 299 2.070796 6.19168004 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 80.1 5.47e-15   NR HEY1085289.1 2973664 g70834 i0 41.9 0.862876254180602 86 46 82.3 2 21 266 504 589 HEY1085289.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 258 80.1 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
29533606 29533606 PRJNA1144090_P_NODE_49570_length_362_cov_4.494810_g49035_i0 PRJNA1144090 49570 362 4.49481 16.2712122 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 89.4 5.28e-18   NR HVS79003.1 2973664 g49035 i0 38.8 2.85082872928177 116 62 96.1 2 349 2 257 363 HVS79003.1 glycine--tRNA ligase [Candidatus Saccharimonadales bacterium] diamond 1032 89.4 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
30702416 30702416 PRJNA1144090_P_NODE_85954_length_271_cov_2.272727_g85419_i0 PRJNA1144090 85954 271 2.272727 6.15909017 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 44.3 0.00907   NR MBQ2638843.1 2026720 g85419 i0 35.3 0.940959409594096 85 43 93 4 257 6 85 158 MBQ2638843.1 RsmD family RNA methyltransferase [Candidatus Saccharibacteria bacterium] diamond 255 44.3 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
31840309 31840309 PRJNA1144090_P_NODE_112937_length_243_cov_0.905882_g112402_i0 PRJNA1144090 112937 243 0.905882 2.20129326 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 171 1.11e-50   NR MBB1562781.1 2026720 g112402 i0 98.8 2 81 1 100 0 1 243 67 147 MBB1562781.1 glycine--tRNA ligase [Candidatus Saccharibacteria bacterium] diamond 486 171 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;