RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA1144090" and tax_kingdom = "Heunggongvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Heunggongvirae · 4 ✖

bioproject 1

  • PRJNA1144090 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28081069 28081069 PRJNA1144090_P_NODE_27125_length_509_cov_2.424312_g26592_i0 PRJNA1144090 27125 509 2.424312 12.33974808 Caudoviricetes sp. 2832643 Viruses Viruses 42.7 0.0274   NR DAZ77189.1 2832643 g26592 i0 34.7 0.288801571709234 49 32 28.9 0 252 106 4 52 DAZ77189.1 MAG TPA: Transcription initiation factor IIE, alpha FINGER, Transcription [Caudoviricetes sp.] diamond 147 42.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
29249301 29249301 PRJNA1144090_P_NODE_43549_length_389_cov_2.367089_g43014_i0 PRJNA1144090 43549 389 2.367089 9.20797621 Caudoviricetes sp. 2832643 Viruses Viruses 43.9 0.0398   NR DAR74955.1 2832643 g43014 i0 51.1 0.347043701799486 45 19 34.7 1 30 164 5 46 DAR74955.1 MAG TPA: hypothetical protein [Caudoviricetes sp.] diamond 135 43.9 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
29312639 29312639 PRJNA1144090_P_NODE_95249_length_256_cov_3.125683_g94714_i0 PRJNA1144090 95249 256 3.125683 8.00174848 Caudoviricetes sp. 2832643 Viruses Viruses 43.1 0.0306   NR DAY35156.1 2832643 g94714 i0 31 1.65234375 71 43 76.2 1 45 239 22 92 DAY35156.1 MAG TPA: putative outer membrane protein [Caudoviricetes sp.] diamond 423 43.1 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
31070677 31070677 PRJNA1144090_P_NODE_18995_length_625_cov_12.318841_g18471_i0 PRJNA1144090 18995 625 12.318841 76.99275625 root 1 Root_unresolved Root_unresolved 63.5 8.32e-8   NR YP_003358882.1 665032 g18471 i0 39.3 1.0368 107 55 51.4 3 221 541 584 680 YP_003358882.1 ribonucleotide reductase [Delftia phage PhiW-14] diamond 648 63.5 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Ionavirus Ionavirus W14

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;