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contig_metadata

34 rows where analysis = "diamond", bioproject = "PRJNA1143173" and tax_phylum = "Streptophyta"

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tax_superkingdom 1

tax_phylum 1

  • Streptophyta · 34 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1143173 · 34 ✖

analysis 1

  • diamond · 34 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13040222 13040222 PRJNA1143173_P_NODE_38591_length_231_cov_5.702532_g38565_i0 PRJNA1143173 38591 231 5.702532 13.17284892 Magnoliopsida 3398 Plants Plants 140 1.73e-36   NR XP_070004125.1 4096 g38565 i0 84 7.85714285714286 75 12 97.4 0 2 226 343 417 XP_070004125.1 uncharacterized protein [Nicotiana sylvestris] diamond 1815 140 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Nicotiana Nicotiana sylvestris
18138541 18138541 PRJNA1143173_P_NODE_8275_length_310_cov_7.033755_g8249_i0 PRJNA1143173 8275 310 7.033755 21.8046405 Carnegiea gigantea 171969 Plants Plants 94 1.33e-21   NR KAJ8420255.1 171969 g8249 i0 92 1.45161290322581 50 4 48.4 0 150 1 128 177 KAJ8420255.1 hypothetical protein Cgig2_014909 [Carnegiea gigantea] diamond 450 94 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Cactaceae Carnegiea Carnegiea gigantea
18884231 18884231 PRJNA1143173_P_NODE_17695_length_293_cov_7.104545_g17669_i0 PRJNA1143173 17695 293 7.104545 20.81631685 Citrus sinensis 2711 Plants Plants 91.3 1.78e-20   NR KAH9686336.1 2711 g17669 i0 48.5 9.81911262798635 99 44 97.3 2 2 286 57 152 KAH9686336.1 peptidyl-prolyl cis-trans isomerase CYP22 [Citrus sinensis] diamond 2877 91.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Rutaceae Citrus Citrus sinensis
20687748 20687748 PRJNA1143173_P_NODE_27777_length_264_cov_3.832461_g27751_i0 PRJNA1143173 27777 264 3.832461 10.11769704 root 1 Root_unresolved Root_unresolved 107 3.0800000000000004e-27   NR VVW89318.1 210225 g27751 i0 52.3 1.95454545454545 86 41 97.7 0 259 2 33 118 VVW89318.1 unnamed protein product [Nymphaea colorata] diamond 516 107 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Nymphaeales Nymphaeaceae Nymphaea Nymphaea colorata
27070387 27070387 PRJNA1143173_P_NODE_35382_length_242_cov_5.248521_g35356_i0 PRJNA1143173 35382 242 5.248521 12.70142082 Vitis vinifera 29760 Plants Plants 91.7 2.26e-19   NR RVW56421.1 29760 g35356 i0 61.5 2.90082644628099 78 29 95.5 1 231 1 684 761 RVW56421.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] diamond 702 91.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Vitales Vitaceae Vitis Vitis vinifera
27355073 27355073 PRJNA1143173_P_NODE_36923_length_237_cov_5.518293_g36897_i0 PRJNA1143173 36923 237 5.518293 13.07835441 Sphagnum balticum 128184 Plants Plants 138 3.34e-38   NR CAM6002002.1 128184 g36897 i0 83.3 1.9746835443038 78 13 98.7 0 4 237 174 251 CAM6002002.1 unnamed protein product [Sphagnum balticum] diamond 468 138 1 Eukaryota Embryophyta Viridiplantae Streptophyta Sphagnopsida Sphagnales Sphagnaceae Sphagnum Sphagnum balticum
27418316 27418316 PRJNA1143173_P_NODE_16803_length_296_cov_3.260090_g16777_i0 PRJNA1143173 16803 296 3.26009 9.6498664 Sphagnum balticum 128184 Plants Plants 101 1.24e-22   NR CAM6003940.1 128184 g16777 i0 91.8 0.496621621621622 49 4 49.7 0 149 3 377 425 CAM6003940.1 unnamed protein product [Sphagnum balticum] diamond 147 101 1 Eukaryota Embryophyta Viridiplantae Streptophyta Sphagnopsida Sphagnales Sphagnaceae Sphagnum Sphagnum balticum
27438959 27438959 PRJNA1143173_P_NODE_38903_length_230_cov_4.732484_g38877_i0 PRJNA1143173 38903 230 4.732484 10.8847132 Magnoliopsida 3398 Plants Plants 110 6.240000000000001e-26   NR KAH9742830.1 2711 g38877 i0 66.7 2.8695652173913 75 25 97.8 0 226 2 992 1066 KAH9742830.1 retrovirus-related pol polyprotein from transposon RE1 [Citrus sinensis] diamond 660 111 0.990990990990991 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Rutaceae Citrus Citrus sinensis
27502012 27502012 PRJNA1143173_P_NODE_37903_length_234_cov_2.633540_g37877_i0 PRJNA1143173 37903 234 2.63354 6.1624836 root 1 Root_unresolved Root_unresolved 43.5 0.0185   NR CAM5999330.1 128184 g37877 i0 64.5 1.51282051282051 31 11 39.7 0 136 228 1 31 CAM5999330.1 unnamed protein product [Sphagnum balticum] diamond 354 43.9 0.990888382687927 Eukaryota Embryophyta Viridiplantae Streptophyta Sphagnopsida Sphagnales Sphagnaceae Sphagnum Sphagnum balticum
27765595 27765595 PRJNA1143173_P_NODE_43544_length_205_cov_4.893939_g43518_i0 PRJNA1143173 43544 205 4.893939 10.03257495 Citrus sinensis 2711 Plants Plants 46.2 5.28e-4   NR KDO63977.1 2711 g43518 i0 78.3 0.336585365853659 23 5 33.7 0 126 194 88 110 KDO63977.1 hypothetical protein CISIN_1g0377632mg, partial [Citrus sinensis] diamond 69 46.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Rutaceae Citrus Citrus sinensis
27797135 27797135 PRJNA1143173_P_NODE_14144_length_299_cov_4.460177_g14118_i0 PRJNA1143173 14144 299 4.460177 13.33592923 Carnegiea gigantea 171969 Plants Plants 47 0.00204   NR KAJ8420957.1 171969 g14118 i0 72.4 0.290969899665552 29 8 29.1 0 13 99 47 75 KAJ8420957.1 hypothetical protein Cgig2_001993 [Carnegiea gigantea] diamond 87 47 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Cactaceae Carnegiea Carnegiea gigantea
27848955 27848955 PRJNA1143173_P_NODE_12404_length_308_cov_6.208511_g12378_i0 PRJNA1143173 12404 308 6.208511 19.12221388 Musaceae 4637 Plants Plants 84.3 1.16e-16   NR RRT75337.1 4639 g12378 i0 71.4 4.90909090909091 63 15 58.4 1 308 129 41 103 RRT75337.1 hypothetical protein B296_00031321 [Ensete ventricosum] diamond 1512 84.7 0.995277449822904 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Zingiberales Musaceae Ensete Ensete ventricosum
27975396 27975396 PRJNA1143173_P_NODE_27105_length_266_cov_3.538860_g27079_i0 PRJNA1143173 27105 266 3.53886 9.4133676 Cuscuta 4128 Plants Plants 52 1.9e-5   NR CAH9059263.1 41803 g27079 i0 92.3 2.95488721804511 26 2 29.3 0 51 128 210 235 CAH9059263.1 unnamed protein product [Cuscuta europaea] diamond 786 52 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Convolvulaceae Cuscuta Cuscuta europaea
28133439 28133439 PRJNA1143173_P_NODE_22345_length_280_cov_2.951691_g22319_i0 PRJNA1143173 22345 280 2.951691 8.2647348 Poaceae 4479 Plants Plants 70.5 1.03e-11   NR KAE8804217.1 4513 g22319 i0 51.5 2.13214285714286 66 32 70.7 0 4 201 205 270 KAE8804217.1 hypothetical protein D1007_19788 [Hordeum vulgare] diamond 597 70.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
28365117 28365117 PRJNA1143173_P_NODE_26186_length_269_cov_2.076531_g26160_i0 PRJNA1143173 26186 269 2.076531 5.58586839 Humulus lupulus 3486 Plants Plants 126 3.33e-32   NR XP_062075644.1 3486 g26160 i0 80.6 8.83271375464684 72 14 80.3 0 1 216 121 192 XP_062075644.1 uncharacterized protein LOC133779726 [Humulus lupulus] diamond 2376 126 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Humulus Humulus lupulus
28428556 28428556 PRJNA1143173_P_NODE_44546_length_198_cov_5.072000_g44520_i0 PRJNA1143173 44546 198 5.072 10.04256 Lolium multiflorum 4521 Plants Plants 70.5 2.19e-12   NR KAK1693823.1 4521 g44520 i0 70 0.606060606060606 40 12 60.6 0 196 77 273 312 KAK1693823.1 hypothetical protein QYE76_010520 [Lolium multiflorum] diamond 120 70.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Lolium Lolium multiflorum
28649569 28649569 PRJNA1143173_P_NODE_11067_length_310_cov_3.392405_g11041_i0 PRJNA1143173 11067 310 3.392405 10.5164555 Citrus sinensis 2711 Plants Plants 45.4 0.00891   NR KAH9701197.1 2711 g11041 i0 56.4 1.61612903225806 39 17 37.7 0 162 278 526 564 KAH9701197.1 Heat shock cognate 70 kDa protein [Citrus sinensis] diamond 501 45.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Rutaceae Citrus Citrus sinensis
28649584 28649584 PRJNA1143173_P_NODE_34087_length_246_cov_3.375723_g34061_i0 PRJNA1143173 34087 246 3.375723 8.30427858 Aegilops tauschii subsp. strangulata 200361 Plants Plants 149 1.3e-39   NR XP_045090196.1 200361 g34061 i0 86.4 1.97560975609756 81 11 98.8 0 244 2 562 642 XP_045090196.1 uncharacterized protein LOC120962006 [Aegilops tauschii subsp. strangulata] diamond 486 149 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Aegilops Aegilops tauschii
28807051 28807051 PRJNA1143173_P_NODE_22688_length_279_cov_2.834951_g22662_i0 PRJNA1143173 22688 279 2.834951 7.90951329 Carnegiea gigantea 171969 Plants Plants 63.5 2.26e-9   NR KAJ8431136.1 171969 g22662 i0 85.7 0.376344086021505 35 5 37.6 0 116 12 299 333 KAJ8431136.1 hypothetical protein Cgig2_010069 [Carnegiea gigantea] diamond 105 63.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Cactaceae Carnegiea Carnegiea gigantea
29565077 29565077 PRJNA1143173_P_NODE_9590_length_310_cov_4.805907_g9564_i0 PRJNA1143173 9590 310 4.805907 14.8983117 Chenopodium quinoa 63459 Plants Plants 62.4 9.63e-9   NR XP_021759195.1 63459 g9564 i0 73 0.358064516129032 37 10 35.8 0 271 161 362 398 XP_021759195.1 uncharacterized protein LOC110724106 [Chenopodium quinoa] diamond 111 62.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Chenopodiaceae Chenopodium Chenopodium quinoa
29722684 29722684 PRJNA1143173_P_NODE_37530_length_235_cov_4.345679_g37504_i0 PRJNA1143173 37530 235 4.345679 10.21234565 Hordeum vulgare 4513 Plants Plants 53.5 1.52e-6   NR KAI4963758.1 4513 g37504 i0 35.8 2.56595744680851 67 43 85.5 0 2 202 65 131 KAI4963758.1 hypothetical protein ZWY2020_010552 [Hordeum vulgare] diamond 603 53.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
29786005 29786005 PRJNA1143173_P_NODE_23891_length_275_cov_5.430693_g23865_i0 PRJNA1143173 23891 275 5.430693 14.93440575 Sphagnum balticum 128184 Plants Plants 104 1.2099999999999999e-23   NR CAM6003810.1 128184 g23865 i0 59.6 1.92 89 35 97.1 1 3 269 240 327 CAM6003810.1 unnamed protein product [Sphagnum balticum] diamond 528 104 1 Eukaryota Embryophyta Viridiplantae Streptophyta Sphagnopsida Sphagnales Sphagnaceae Sphagnum Sphagnum balticum
30165037 30165037 PRJNA1143173_P_NODE_42392_length_212_cov_5.388489_g42366_i0 PRJNA1143173 42392 212 5.388489 11.42359668 Cuscuta epithymum 186058 Plants Plants 61.2 7.4e-9   NR CAH9137158.1 186058 g42366 i0 46.4 3.15566037735849 56 30 79.2 0 5 172 323 378 CAH9137158.1 unnamed protein product [Cuscuta epithymum] diamond 669 61.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Convolvulaceae Cuscuta Cuscuta epithymum
30228309 30228309 PRJNA1143173_P_NODE_16352_length_296_cov_8.681614_g16326_i0 PRJNA1143173 16352 296 8.681614 25.69757744 Sphagnum tenellum 128247 Plants Plants 84.3 1.73e-16   NR CAM6053624.1 128247 g16326 i0 74 1.52027027027027 50 13 50.7 0 147 296 66 115 CAM6053624.1 unnamed protein product [Sphagnum tenellum] diamond 450 84.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Sphagnopsida Sphagnales Sphagnaceae Sphagnum Sphagnum tenellum
30418320 30418320 PRJNA1143173_P_NODE_25293_length_271_cov_5.535354_g25267_i0 PRJNA1143173 25293 271 5.535354 15.00080934 Brachypodium distachyon 15368 Plants Plants 53.9 5.98e-6   NR XP_014758531.2 15368 g25267 i0 39.5 0.841328413284133 76 41 80.8 3 221 3 85 158 XP_014758531.2 uncharacterized protein LOC104584666 isoform X1 [Brachypodium distachyon] diamond 228 53.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Brachypodium Brachypodium distachyon
31196486 31196486 PRJNA1143173_P_NODE_4695_length_394_cov_7.311526_g4669_i0 PRJNA1143173 4695 394 7.311526 28.80741244 root 1 Root_unresolved Root_unresolved 59.7 6.06e-8   NR XP_006466862.1 2711 g4669 i0 41.8 9.84517766497462 79 42 58.6 2 103 333 109 185 XP_006466862.1 uncharacterized protein LOC102620497 [Citrus sinensis] diamond 3879 60.1 0.993344425956739 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Rutaceae Citrus Citrus sinensis
31207394 31207394 PRJNA1143173_P_NODE_21795_length_281_cov_8.014423_g21769_i0 PRJNA1143173 21795 281 8.014423 22.52052863 Triticum aestivum 4565 Plants Plants 103 4.25e-25   NR XP_044354544.1 4565 g21769 i0 78.3 0.640569395017794 60 13 64.1 0 181 2 1 60 XP_044354544.1 peroxisome biogenesis protein 3-1-like [Triticum aestivum] diamond 180 103 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
31513356 31513356 PRJNA1143173_P_NODE_19136_length_289_cov_6.490741_g19110_i0 PRJNA1143173 19136 289 6.490741 18.75824149 root 1 Root_unresolved Root_unresolved 43.9 0.0256   NR KAH8972093.1 53036 g19110 i0 38.3 1.32871972318339 81 38 71.6 3 246 40 300 380 KAH8972093.1 hypothetical protein BDL97_02G176300 [Sphagnum fallax] diamond 384 44.3 0.99097065462754 Eukaryota Embryophyta Viridiplantae Streptophyta Sphagnopsida Sphagnales Sphagnaceae Sphagnum Sphagnum fallax
31777133 31777133 PRJNA1143173_P_NODE_33957_length_246_cov_6.156069_g33931_i0 PRJNA1143173 33957 246 6.156069 15.14392974 Triticum aestivum 4565 Plants Plants 85.1 4.81e-17   NR XBI11942.1 4565 g33931 i0 52.5 0.975609756097561 80 38 97.6 0 243 4 266 345 XBI11942.1 hypothetical protein VPH35_138889 [Triticum aestivum] diamond 240 85.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
31840293 31840293 PRJNA1143173_P_NODE_33137_length_249_cov_0.875000_g33111_i0 PRJNA1143173 33137 249 0.875 2.17875 Citrus x changshan-huyou 2935761 Plants Plants 84 1.18e-16   NR KAK9233386.1 2935761 g33111 i0 76 0.602409638554217 50 12 60.2 0 98 247 89 138 KAK9233386.1 hypothetical protein WN943_023635 [Citrus x changshan-huyou] diamond 150 84 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Rutaceae Citrus Citrus x changshan-huyou
32788420 32788420 PRJNA1143173_P_NODE_10160_length_310_cov_4.219409_g10134_i0 PRJNA1143173 10160 310 4.219409 13.0801679 Vitis vinifera 29760 Plants Plants 42.4 0.0395   NR CAN70445.1 29760 g10134 i0 75 0.232258064516129 24 6 23.2 0 168 239 1 24 CAN70445.1 hypothetical protein VITISV_015574 [Vitis vinifera] diamond 72 42.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Vitales Vitaceae Vitis Vitis vinifera
32809075 32809075 PRJNA1143173_P_NODE_23760_length_276_cov_1.517241_g23734_i0 PRJNA1143173 23760 276 1.517241 4.18758516 Magnoliopsida 3398 Plants Plants 54.7 3.51e-6   NR KAH9782132.1 2711 g23734 i0 71.4 0.760869565217391 35 10 38 0 107 3 1 35 KAH9782132.1 ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase [Citrus sinensis] diamond 210 54.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Rutaceae Citrus Citrus sinensis
32820063 32820063 PRJNA1143173_P_NODE_19560_length_288_cov_4.902326_g19534_i0 PRJNA1143173 19560 288 4.902326 14.11869888 Citrus sinensis 2711 Plants Plants 152 1.42e-41   NR KAH9768955.1 2711 g19534 i0 78.4 14.6666666666667 88 19 91.7 0 4 267 99 186 KAH9768955.1 reverse transcriptase domain-containing protein [Citrus sinensis] diamond 4224 152 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Rutaceae Citrus Citrus sinensis
32882860 32882860 PRJNA1143173_P_NODE_15660_length_298_cov_3.524444_g15634_i0 PRJNA1143173 15660 298 3.524444 10.50284312 Brachypodium distachyon 15368 Plants Plants 63.9 1.73e-9   NR PNT75224.1 15368 g15634 i0 35.7 1.97315436241611 98 53 88.6 2 30 293 178 275 PNT75224.1 hypothetical protein BRADI_1g28896v3 [Brachypodium distachyon] diamond 588 63.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Brachypodium Brachypodium distachyon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;