RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1143173" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1143173 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18138091 18138091 PRJNA1143173_P_NODE_28755_length_261_cov_4.765957_g28729_i0 PRJNA1143173 28755 261 4.765957 12.43914777 Acrasis kona 1008807 Heterolobosea other_Eukaryota 140 1.58e-38   NR KAL0488758.1 1008807 g28729 i0 80.2 0.988505747126437 86 5 98.9 1 259 2 62 135 KAL0488758.1 hypothetical protein AKO1_003897 [Acrasis kona] diamond 258 140 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
31492696 31492696 PRJNA1143173_P_NODE_33816_length_247_cov_2.448276_g33790_i0 PRJNA1143173 33816 247 2.448276 6.04724172 Acrasis kona 1008807 Heterolobosea other_Eukaryota 127 2.3999999999999999e-32   NR KAL0478316.1 1008807 g33790 i0 84 0.983805668016194 81 13 98.4 0 5 247 376 456 KAL0478316.1 hypothetical protein AKO1_008574 [Acrasis kona] diamond 243 127 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;