RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1139127" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA1139127 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27418293 27418293 PRJNA1139127_P_NODE_25723_length_356_cov_1.098940_g25231_i0 PRJNA1139127 25723 356 1.09894 3.9122264 Malassezia globosa associated totivirus 1 3048756 Viruses Viruses 156 1.12e-41   NR CAI9858973.1 3048756 g25231 i0 64.4 0.99438202247191 118 42 99.4 0 1 354 10 127 CAI9858973.1 RNA-dependent RNA polymerase [Malassezia globosa associated totivirus 1] diamond 354 156 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Malassezia globosa associated totivirus 1
30481182 30481182 PRJNA1139127_P_NODE_46833_length_245_cov_0.906977_g46340_i0 PRJNA1139127 46833 245 0.906977 2.22209365 Saccharomyces 2 3431059 Viruses Viruses 139 5.5e-36   NR NP_660178.1 186772 g46340 i0 82.7 0.991836734693878 81 14 99.2 0 2 244 63 143 NP_660178.1 RNA-dependent RNA polymerase [Saccharomyces 20S RNA narnavirus] diamond 243 139 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Narnavirus saccharominor
32220168 32220168 PRJNA1139127_P_NODE_47078_length_245_cov_0.901163_g46585_i0 PRJNA1139127 47078 245 0.901163 2.20784935 Malassezia globosa associated totivirus 1 3048756 Viruses Viruses 88.2 3.82e-18   NR CAI9858974.1 3048756 g46585 i0 82 0.612244897959184 50 9 61.2 0 243 94 638 687 CAI9858974.1 capsid protein [Malassezia globosa associated totivirus 1] diamond 150 88.2 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Malassezia globosa associated totivirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;