RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1139127" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 3 ✖

bioproject 1

  • PRJNA1139127 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26849063 26849063 PRJNA1139127_P_NODE_14681_length_528_cov_1.224176_g14198_i0 PRJNA1139127 14681 528 1.224176 6.46364928 Cyanobacteria bacterium FACHB-63 2692766 Bacteria Bacteria 70.5 1.16e-11   NR MBD1847221.1 2692766 g14198 i0 77.8 0.528409090909091 45 10 25.6 0 507 373 119 163 MBD1847221.1 phage tail protein [Cyanobacteria bacterium FACHB-63] diamond 279 70.5 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         Cyanobacteria bacterium FACHB-63
27418296 27418296 PRJNA1139127_P_NODE_42043_length_253_cov_0.866667_g41550_i0 PRJNA1139127 42043 253 0.866667 2.19266751 Cyanobacteriota bacterium 2847862 Bacteria Bacteria 157 2.11e-42   NR MBX9695215.1 2847862 g41550 i0 90.5 0.99604743083004 84 8 99.6 0 253 2 94 177 MBX9695215.1 Tn3 family transposase [Cyanobacteriota bacterium] diamond 252 157 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         Cyanobacteriota bacterium
28523249 28523249 PRJNA1139127_P_NODE_43627_length_250_cov_0.881356_g43134_i0 PRJNA1139127 43627 250 0.881356 2.20339 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 161 3.5099999999999998e-47   NR MBX9571636.1 2364082 g43134 i0 100 0.996 83 0 99.6 0 1 249 109 191 MBX9571636.1 3-methyl-2-oxobutanoate hydroxymethyltransferase [Candidatus Obscuribacterales bacterium] diamond 249 161 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;